Pseudochaenichthys georgianus (South Georgia icefish): 117440870
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Entry
117440870 CDS
T09629
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117440870
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117440870
Protein phosphatases and associated proteins [BR:
pgeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117440870
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117440870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
117440870
NCBI-ProteinID:
XP_033932983
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MILPWVVGFIWAEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYFKYNSSRP
REEWEMWHPTLIAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYC
LVLLAFANGLNQLYFYYETKASEEPNNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNL
YVTNVKARHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTK
LWMSYFDEGGTLPPPFNIIPSPKSILFLLLWLHNKLCRGGGPAGEHSHKCENLREFTERH
ADSLIQNQHYQEVIRSLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGN
RRPPRRQYSSSSETTRDDGAAASEDDSESGDGCSSQRSKGVTFMTPMEDEEDEKRTSPTI
GVSELVRSISGMTRIEGVGDGEEEEEEVEEEEEEDGKPKSNGLKTAVVPHSSSSPSSFSS
TFSSSFSRTRSRLQRLAPGSKTDSFKRLSFLFSRSKRRAPPTPLQSSSSSYTISDGFLRP
LRSHDFDLDDVSRSETRLHELGRRRRSGDLIIGDPAFSPRRTNGGRDSLLLPLPPPCPCQ
SLHCASNMSESSSRLLDSSEDVFQGEGGAGGGVEEGGGGGGVGVMMVMGGWVGPCGDDVI
GDSCDVIEESVTTQL
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcccctgggtggttgggttcatctgggcggagattaaggagatgtgggacgga
ggcttcacagaatatatccacgactggtggaacctgatggacttcgccatgaactctctg
tacctcgccaccatctcgctgaagatagtggcctacttcaaatataactcctctcggccc
agggaggagtgggagatgtggcacccgaccctcatcgccgaggctctgtttgccattgct
aacatcttcagctctctgaggctcatctctctcttcaccgctaactcccacctgggcccg
ctgcagatctccctggggaggatgctgctggacatcctcaagttcctcttcatctactgc
ctggtgctgctggcgtttgccaacggtctgaaccagctgtacttctactacgagacgaag
gcctccgaggagccgaacaactgcaaaggcatccgctgtgagaggcagaacaacgccttc
tccacgttgttcgagacgctgcagtcgttgttctggtcgatattcgggcttctgaatctg
tacgtgaccaacgtgaaggcgaggcacgagttcacggagtttgtcggggcgacgatgttc
gggacgtacaacgtgatctctctggtggttctgctcaacatgctgatcgccatgatgaac
aactcctaccagctcatcgccgatcacgccgacatcgagtggaagtttgctcgcaccaaa
ctgtggatgagttactttgacgagggcggcacgctgcccccccccttcaacatcatcccc
tcccccaaatccatcctcttcctgctgctgtggctccacaacaagctgtgcagggggggc
ggccccgcaggcgagcactcgcacaagtgtgagaacctgcgggagttcacggaacgccac
gctgacagtctgattcagaaccagcattaccaggaagtgatccgcagcctggtgaagagg
tacgtggcggccatgatacgcagcgccaagacggacgagggactgacggaggaaaacttt
aaggagttgaagcaggacatctccagtttccgatacgaagtcctggatctcctcggtaac
cgtcgtcctccccggcgacagtactcctcgtccagcgagacgacgagagacgacggcgcc
gcggcgtcagaagacgacagcgaatcaggcgacggctgctcgagccagaggtcaaagggc
gtgaccttcatgacgccaatggaggacgaggaggacgagaagaggacgtcgccaacgatc
ggcgtgtccgagttggtgcgctcgatctcgggcatgacgaggatagaaggagtgggcgat
ggcgaggaggaagaggaggaagtggaggaagaagaggaagaggacgggaaaccaaagagc
aatgggctaaaaacggccgtcgtccctcattcctcctcctccccttcgtctttctcctca
actttctcctcgtcgttctcccgcacgaggagtcgcctgcagcgcctggctcccgggtcg
aaaacggactccttcaaacgcctgtccttcctgttttcccgctcaaaacgccgagccccg
cccacgccgttgcagtcctcctcgtcgtcctacaccatctcagacgggttcctgcgcccc
ctgcggagccacgacttcgacctggacgacgtgtcgaggagcgagacgcgtctgcacgaa
ctgggacgccgtcgacggtcgggcgacctcatcatcggcgacccggcgttctccccgcgg
aggacgaacggggggcgggactccctcctcttgcccctcccccctccgtgcccctgccaa
tcactgcactgcgcttccaacatgtcagaatccagctcccgcctcctggactccagcgag
gacgttttccagggcgaaggaggagcaggtggaggtgtggaggaaggaggaggtgggggt
ggggtcggggtgatgatggtgatgggcgggtgggttggaccgtgcggtgatgatgtcatc
ggggacagctgtgatgtcatagaggaatctgtcaccacgcagctatag
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