Pseudochaenichthys georgianus (South Georgia icefish): 117444886
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Entry
117444886 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117444886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117444886
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117444886
BRITE hierarchy
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
EGF_3
Psg1
Motif
Other DBs
NCBI-GeneID:
117444886
NCBI-ProteinID:
XP_033936159
EnsemblRapid:
ENSPGEG00000017160
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MLLPVRLRNMRRLFRASLIFFLFTLVHTVPLTTCGSDSFQCGNGRCLPARWACDGMDDCG
DATDELPATCMTKTCKPTEFSCTDRLNQCLPESWHCDGKADCENGADEESCAPKLCTKTE
FRCGSGQCVSSSFACDDEADCDDGSDEASCPPVTCSAASFQCNNTVCVPGLWACDGDMDC
SDGSDEWPQSCGGAKSAGTVPAHQCSNMEFPCGSGECIHSSWKCDGGADCADRSDEAGCA
HTTCAPDEFECDDGSCIHGSRQCNRQFDCRDRSDEFGCINASHCDGPTHFKCRSGECISM
EKVCDQKRDCRDWTDEPLRECGSNECLSTNGGCSHICNDLKIGYECLCPTGYNLVEKKRC
EDIDECASPDTCSQICINLVGSFKCQCEEGYQVDPATKACKAIGTIAYLFFTNRHEVRKM
TLDKSEYTRVIPRLKSAVALDVNMATKDIYWSDIXQKKIYRAPMDSAENPAEYSVVVGTD
MDAPEGIAFDWIHGNLYWTDSIRSTISVVTADGSRRKTIFRRDLSKPRAIVVDPHSNFLY
WTDWGSPAKIEKGGLNGGDRTALVTDNIEWPNGITIDLLNQRLYWVDSKLHTLSSIDVQG
GGRRTIILDEHKLAHPLGLTVFEERVYWTDVSNNAIFSANRLTGENITAVAEHLSSPEDI
ILFHNLKQPAGRDWCQVSGCEYLCLAAPQVGRHPPKYTCVCSDDMMLARDRRSCVPAVPT
PEAPVQPQVPATDPPRRPPVPASTTPKTLVQTTPKPQIRTTHKLPVRTTRKPPVRTTPVP
IITTTAARPAPRTTIKPPVKTTTPEPKVPSPRSVNPKIPQTTTGAPVTSPDIQHAFATAV
PNTASTTPIALNIALPLAIICLVAIGAVLLWRNYRQKNTNTIHFDNPVYQKTTEDQVHIW
RSNSIDGYSYPKKQVVSLDEEEDNPVFTEN
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttccagtgcgcctgcgaaacatgagacggctgtttcgcgcgtctttgatattc
tttctcttcaccctcgttcatacagttccgttgacgacatgtggatccgatagcttccag
tgtgggaacggtagatgcttgccggctcgatgggcgtgtgacggcatggacgactgtgga
gacgccactgatgaacttcctgctacctgcatgactaagacctgcaagccgacagagttc
agctgcacggaccgtctgaaccagtgcctcccggagagctggcactgtgacgggaaagct
gactgtgagaatggagctgatgaggagagctgtgcgcccaagctgtgcacgaaaacagag
ttccgctgcgggagtggtcagtgcgtgtcgtcgtccttcgcgtgtgacgacgaggcggat
tgtgacgatggcagcgatgaagcgtcctgtccgccggtcacctgcagcgcggcctccttc
cagtgcaacaacaccgtctgcgtgcccgggctgtgggcctgcgacggagacatggactgc
tccgacggctccgacgagtggcctcagagctgcggaggagcgaagtcagcggggactgtt
cccgctcatcagtgttcgaacatggagttcccctgcggcagcggggagtgcatccacagc
agctggaagtgcgacggaggcgccgactgcgccgatagatccgatgaagcaggatgtgca
cacaccacctgcgctcccgatgagttcgaatgcgatgacggttcttgtatccacggcagc
cggcagtgcaaccgtcaattcgactgcagggaccgcagcgatgaattcggctgcatcaac
gcaagccactgcgatggtccgacccactttaagtgccgcagcggggagtgtatcagcatg
gagaaggtgtgtgaccagaagcgtgactgcagggattggacagacgagcctctgagggaa
tgtggctccaatgaatgcctctccaccaacggcggctgctcgcatatttgcaatgacctc
aagatcggatacgagtgtctgtgtcctacgggatataacctggtggagaaaaagcgctgt
gaagacatcgacgagtgtgccagcccggacacctgcagccagatctgcatcaacctggtg
ggcagcttcaaatgccaatgtgaggaggggtaccaggtggacccggcaaccaaagcctgc
aaggccatcggtacaatcgcctacctgttcttcaccaaccgtcatgaagtcagaaagatg
acgttggataagagcgagtacaccagagtgattccccgtctgaagagcgctgtggctctg
gacgtgaacatggccaccaaagacatctactggtccgacatcntccagaagaagatctac
agagctccgatggactcggcagaaaacccggctgaatacagcgtagtggtcggcacagac
atggacgcacctgaaggcatcgcgttcgactggatccacgggaacctgtactggaccgac
agcatccgcagcaccatctccgtggttaccgctgatggcagccgccgaaaaactatcttc
cgtcgagatctatccaaaccgcgtgccattgtggtcgacccccacagcaacttcctttac
tggaccgactgggggagtcccgctaagatcgagaaaggaggtttaaacggaggagaccga
accgctctggtcaccgacaacatcgagtggccaaatgggatcacaatcgacctgttgaac
cagcggctgtactgggtggactccaagctgcacaccctctccagcatcgatgtgcagggc
ggcggtcgacgcaccatcatcctggacgaacacaagctggctcaccctctgggcctcact
gtgtttgaggaaagagtgtattggaccgacgtcagcaacaatgccatcttcagtgccaac
aggctgacgggggagaacatcacagccgtggcagagcacctctcatccccagaagacatc
atcctcttccataacctcaaacagcccgctggcagggattggtgccaggtctccggctgt
gaatacttgtgcctggcagctcctcaagtgggccgccacccccccaaatacacatgtgtg
tgttcagatgacatgatgctagcccgggataggaggtcatgcgtacctgccgtgcccacg
cctgaagctcctgtgcagcctcaggttccagctacagaccctcctcgtcgccctccagtt
ccagccagcaccacacccaagaccctggtccaaaccaccccaaaaccccaaatccgtacc
acccacaaactcccagtccgtaccacccgcaaacccccagtccgtaccaccccagttccc
ataatcaccaccactgcagccaggccagcaccacgcaccaccatcaaacctccagtaaag
accaccaccccagaaccaaaggtcccgtcacccaggtcggtgaaccctaaaatcccccag
accaccacaggggctccagtcacatctccagatattcaacatgcatttgccactgctgta
cccaacactgcctccaccacgccgatagctctgaatatagcattacctctggcgatcatt
tgtctggtggctattggtgccgtgctactatggaggaactacaggcagaaaaacaccaac
acaatccactttgacaaccccgtttaccagaaaaccaccgaggaccaagtgcacatttgg
aggagcaacagcattgatggttactcctacccaaaaaaacaagtcgtgagcttggatgaa
gaagaggacaatccagtcttcacagaaaactga
DBGET
integrated database retrieval system
