Pseudochaenichthys georgianus (South Georgia icefish): 117445943
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Entry
117445943 CDS
T09629
Symbol
ptprc
Name
(RefSeq) receptor-type tyrosine-protein phosphatase C isoform X1
KO
K06478
receptor-type tyrosine-protein phosphatase C [EC:
3.1.3.48
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
pgeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117445943 (ptprc)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117445943 (ptprc)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117445943 (ptprc)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pgeo04090
]
117445943 (ptprc)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117445943 (ptprc)
Protein phosphatases and associated proteins [BR:
pgeo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117445943 (ptprc)
CD molecules [BR:
pgeo04090
]
Proteins
117445943 (ptprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
DSPc
Tc-R-P
PTP-SAK
Y_phosphatase3
PTP-NADK
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
117445943
NCBI-ProteinID:
XP_033937785
LinkDB
All DBs
Position
4:20151196..20167687
Genome browser
AA seq
1333 aa
AA seq
DB search
MAGRCGPTTLLLWAGIIALANYVSTTLPPPTSTNSPSAFTLPISTSTPRNMTETAVISPD
NQTTAHKPPLITPTLTSNPPMPSTYSTSISATTAPPTITSPSPKPTNALDLPTNTSQPQT
QPPITTSNTSVTTNAKAETQAPPPLECSYTVTTSKTGFNITMNGNFTTGDYIINIKETGR
PDTGNSYPLQFSNESLTHEIKRLKPCTEYEHDVAFNDAAGKETPCTTQTNTTKTNEWKEG
DIKEGSCMTGYVCYRSDWDISSSLLTSNNIIISAEPCTSDKNRICFKPRYIDICTNLTTT
FTSGKCNALSLTRSITADFLNPSEINQTSSTKLPAEIKTDLPPKCDNLHITYSCQENGKP
NELKNLTVLEPYTDYNCTGQIMENYVNIKNTTAIKFRIDCDLTIRIIEQRVTNASIGLSW
TTDSKNCGVVLPELQKLSYECSCKSTQSYEKTVADKNQFGGTCQMYGLKPYTEYNCAVQP
KYNRNYVPAPTHGKQIMTAIGVPGAINNLKVNLLEHNVIHATCDPPNDFNGPRKDYIARL
YGGGDVLIETLNPTKCKFEFKALSYSTEYELKVTASNGHNESIPIGETVSTSYNDKAVIG
FLVFLIILTSVALLLVVYKIYVLRRRQSHNLGESMMLITTANDEENLLAVEPIAAEVLLE
TYKRKLADEGRLFLAEFQSMPRIFTRYTVKEAKKACNVPKNRYVDILPYDYNRVQLTTGN
GETGCDYINASFIDGYKESKKYIAAQGPKEETVSDFWRMVWEQQSSIIVMVTRCEEGNRV
KCAQYWPSRDREAEIFEEFIVKLKSEDHCPDYTIRHLSLTNKREKNSEREVTHIQFMSWP
DHGVPGEPHLLLKLRRRVNAFKNFFSGPIVVHCSAGVGRTGTYIGIDAMMECLEAEGRVD
IYGYVVRLRRQRCLMVQVEAQYILIHQALLEHNQFGETETTVSELHSTLSTLKQKNSSSE
PTLLEDEFERLPIYKNWRTFNKGLTEENKKKNRFTSVIPYDYNRVLLKLDEGRSRDSDPD
DDEEEEESSDEEEEDSSMYINASHIDGYWGPQNFIAAQTPLPDTMADFWLMVYQKKTSAI
VMLSESSEESNSIYWDKDKKTFGDLEVEVESTDTSPTFITRNMLLRHVKRKETRSVKQFQ
FLTWSNNELPEKAQELTDMIKDIKQSCGGVQSQRNSPVVVHCNNGSSRSGMFCALWNLLD
SAETEKLMDVFQVAKTLRKERQGMLSNLEQYQFLYEALEGVFPVQNGELKAVQASSVDSV
QVVNETKAAEKPEGKTAASTTCNDPQGAAESSPLVADGGKEDKKEEPEEVSSVPIETTPL
QDTSNGATVTVEV
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgctgtggaccgacgaccctgctgctctgggctgggatcatcgctttggcc
aactatgtttcaaccaccttacctccacccaccagcacaaattccccttcagcattcact
ttaccaatcagcacctcaactccacgcaacatgacagaaactgctgtcatatctccagac
aatcaaacaactgcccacaaacctccactcatcactccaacactcacctcaaacccacca
atgccttcaacatattcaactagtatatctgccactactgctcctccaacaatcacctca
ccctcacccaaacccaccaacgcattagacttgccgacaaacacctctcaaccccagact
caacctccaatcaccacgtccaacacatcagtgactactaacgccaaagccgagactcaa
gcccctccacctctggagtgttcttacacggtcacaaccagcaagactggcttcaacatt
accatgaatgggaactttacgactggcgactacatcatcaacatcaaagaaacgggccga
ccagatactggaaacagctatcctttgcagttctccaatgaaagcttaacacatgaaatc
aaacgcctgaagccctgcactgagtatgagcatgatgtggcatttaatgatgctgctggc
aaagaaacaccctgcaccacacaaacaaatacaactaagacaaacgaatggaaagaaggt
gatattaaagaaggcagctgcatgactggatatgtttgttaccgtagtgactgggacatc
agctcatcactattaacgtcaaataatataataatttcagctgagccgtgcacaagtgac
aaaaataggatctgtttcaaacctcgttacattgacatttgcaccaatttgactacgacg
ttcacttcaggaaagtgtaacgccttgagcctcaccagaagcatcactgctgatttctta
aatccaagtgaaataaatcaaacgagttcaactaaacttcctgcagaaataaaaacagat
ttgcctccaaagtgtgacaatctccacatcacttacagctgtcaggaaaatggaaaaccc
aatgagctgaagaatcttactgtcctggagccctacacagactacaactgtaccggtcag
atcatggagaactatgtcaacataaaaaacacaactgctatcaagttcaggattgactgt
gatcttacaataagaatcatagagcaacgtgtcaccaacgcctccattggtctgagttgg
accacagacagtaagaactgtggagttgtccttcctgaacttcagaagctttcttatgag
tgcagctgtaaatctactcaatcatatgagaaaaccgtcgctgacaaaaatcaattcgga
ggaacatgtcaaatgtatggactgaaaccatacaccgagtataactgtgcagtccaaccc
aaatacaacagaaactatgttcctgcaccaactcatggaaaacagattatgacagcgatt
ggagtgccaggagcaattaacaacctgaaggtgaatcttctagagcataacgtgattcac
gcaacctgtgatcctccaaatgattttaatggacctaggaaggattacatcgcacgtctt
tatggtggtggtgatgtcctgattgagactctgaacccaaccaaatgcaagtttgaattc
aaagctttaagctactcaaccgaatacgaactgaaggtgactgcttccaatggacacaac
gagagcattcccatcggagagactgtctccacttcctataatgacaaagctgtcattggg
tttttggtcttcctcatcatcctcacgtctgtggccctacttctggtcgtctacaagatt
tacgttctgaggcgcagacagtcccacaatctgggtgaaagcatgatgcttattactaca
gcaaacgacgaggagaatctgctggcagtggagccgatcgcagcagaggtcctgctggaa
acctacaagaggaagcttgctgatgagggaagactcttcctggctgagtttcagagcatg
cccagaatcttcacgcggtacaccgtgaaagaggccaaaaaggcgtgcaacgtccccaag
aatcgctacgtggacatcctgccatatgattataaccgtgttcagctgaccactggaaat
ggggagacaggctgtgactacatcaatgccagctttatcgatgggtacaaggaatccaaa
aaatacatcgcagcacaagggccaaaggaagagactgtcagtgacttttggaggatggtg
tgggagcagcagtcctctatcatcgttatggtaacgcgttgtgaagaaggaaaccgggtc
aaatgtgcgcagtactggccgtctcgagaccgcgaggcagagatctttgaggagtttatt
gtgaagctgaagtcagaggaccactgcccagattacaccatccgccatctcagccttact
aataagagggagaagaactcagagagggaagtgactcacatccagttcatgagctggccg
gatcacggcgtccccggtgagccacatctgctcctgaaactgaggcggcgcgtcaatgcg
ttcaagaatttcttcagcggccccatcgttgttcactgcagcgcgggggtcggcaggaca
ggcacatacattggcattgatgccatgatggagtgtctggaggcggagggcagagtcgac
atctacggttacgtggtcagactccgcagacagagatgtctaatggttcaagtagaggcc
cagtacatcttgatacaccaggcgctgctggagcacaatcagtttggagagactgagacc
actgtgtccgagctccacagcaccctgagcacgctcaaacagaaaaactccagcagtgaa
cccaccttattggaggatgagtttgagagactccccatctataaaaactggaggacattc
aacaaggggctcacagaagagaacaagaagaagaatcgctttacttctgtcatcccatat
gactacaaccgagtgttgctgaaattagatgaaggacgcagtcgtgacagtgaccctgat
gatgatgaggaagaggaagaatcatcagatgaggaggaagaggattcatctatgtacatc
aatgcctcccacatagatgggtactggggtccacaaaacttcatcgcagcgcagaccccc
ctgccggacaccatggctgacttctggttgatggtttaccaaaagaaaacatctgcaatc
gtcatgctctcagagagcagtgaggagtctaactctatctactgggacaaagataagaaa
acgtttggggacctcgaggtggaagtggaaagcacagacacctccccaactttcatcacc
cgcaacatgctgctccgtcacgtcaagaggaaagagactcggtcggtgaaacagttccag
ttcctgacgtggtccaacaacgagctgccggagaaagctcaggagctcacagacatgatc
aaggacatcaagcagagctgtggaggagtacaatcacagaggaactcacccgttgtggtc
cactgcaataatggctcatcccggtcagggatgttctgtgctctgtggaacctgctggac
agcgctgagactgagaagttgatggatgttttccaggtggccaaaaccctgcgcaaggag
agacaaggcatgctgtccaacctggagcagtaccagttcttgtacgaggccctggagggg
gtcttccctgtgcagaacggggaactgaaagcagtccaggcctcttcagtcgactccgtc
caggttgtgaatgaaaccaaagcagcagagaagccagaagggaagacggctgccagcact
acctgcaatgacccgcaaggggcagcagagagctctcctcttgtggctgatggtgggaag
gaagacaaaaaagaggagcctgaagaggtttccagtgtccccatagagaccacccctctg
caggacaccagcaacggagccacggttactgtggaggtctga
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