Pseudochaenichthys georgianus (South Georgia icefish): 117448626
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Entry
117448626 CDS
T09629
Symbol
nr1h4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117448626 (nr1h4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pgeo03310
]
117448626 (nr1h4)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117448626 (nr1h4)
Nuclear receptors [BR:
pgeo03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
117448626 (nr1h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Put_Phosphatase
bDLD2
PBP_dimer
Motif
Other DBs
NCBI-GeneID:
117448626
NCBI-ProteinID:
XP_033941839
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All DBs
Position
6:complement(23445925..23465404)
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AA seq
485 aa
AA seq
DB search
MNEWVGLDFNVVGPLQIPPSDEFSISESSHLFDILADQGSPFLQDPDILPFTYPSTQYPS
MEPTMSFTPYYSSQNFYPQYNGEEWYSHTGIYELRKGPMEVGYDAEMEEVTAVLPAVCKR
TRHMSQAGRVKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSGGNCEM
DMYMRRKCQECRLRKCKEMGMLAESGLLTEIQCKSKRLRKNTKTSPGQSTGDETEAADNT
DNKQVTSTTKLSKEKVEITKEQRALIKAILDAYNRHQIPQDVTKKLLQEQYSAEENFLLL
TEVATSQVQVLVEFTKNIPGFLSLDREDQIALLKGSAVEAMFLRSAQVLSKKMPIGYTEV
LEERIRKSGMSEEFMTPMFNFYKSIGELHMTQEEQALLTTITILTPDRPYVKSHEAVERL
QETMLDVLRKLCVLQHPQEPQYFARLLGRLTELRTLHHYHVEMLTSWKTNDHKFTPLLCE
IWDVQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtgggtgggcctcgactttaatgtggtgggaccgctgcaaatcccacccagc
gatgaattctccatctcagagagctcccacctctttgatattctggcagatcaaggaagt
cctttcctgcaggaccctgacatcttacccttcacctatcccagcacgcagtatccctcc
atggagccgactatgtctttcacaccatactactccagtcagaacttctaccctcagtac
aacggagaggagtggtactcgcacacagggatatatgaactaaggaaaggacccatggag
gtcggctatgatgctgagatggaggaggtgacggctgtattgcctgccgtgtgcaagagg
acacgacacatgtcacaggcgggaagggtcaaaggggaggaactgtgtgtggtgtgtggt
gacaaggcctctggataccactataacgctctaacatgtgagggatgtaaaggtttcttc
agacgaagcataaccaagaatgctgtgtacaaatgcaagagtggcgggaactgtgagatg
gacatgtacatgcgcaggaaatgccaagagtgccggctaagaaagtgcaaagagatgggc
atgctggctgaatcaggtctactgacggagatccagtgtaagtctaaaaggctgcgaaaa
aacactaagacctccccgggacagtcaaccggagacgagacagaagcagcggacaacaca
gacaacaaacaggtcacctcaaccaccaaactgtccaaggagaaagtcgaaatcaccaaa
gagcagcgggcacttatcaaagccatcttagatgcttacaaccgacatcaaattcctcaa
gatgtgaccaaaaaactgctgcaagaacagtacagtgcagaggaaaacttcctcctgttg
acagaggtggcaacaagtcaagttcaagtactggtggagtttacaaaaaatattccaggc
tttctctctctggatcgtgaggatcagatcgctctgctgaagggctcggctgtggaggcc
atgttccttcgctcagctcaggttctcagcaaaaagatgcccatcggatacacagaggtt
ttagaggagagaatacgcaagagtggtatgtcagaagaattcatgacacccatgttcaac
ttttacaaaagcatcggagaactccacatgacacaggaagaacaggctctcctcaccacg
ataaccatcctgacaccagaccggccttacgtgaagagccatgaggcggtggagagactc
caggagaccatgctggacgtgctgaggaagctgtgtgtcctgcagcaccctcaggagccg
cagtactttgcccgcctgctgggccgcctgacggagctgagaacactacaccactaccac
gtagagatgctcacctcctggaagaccaacgaccacaagtttacgccgctgctctgtgag
atctgggacgtgcagtga
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