Pseudochaenichthys georgianus (South Georgia icefish): 117449012
Help
Entry
117449012 CDS
T09629
Symbol
itchb
Name
(RefSeq) itchy E3 ubiquitin protein ligase b isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04120
Ubiquitin mediated proteolysis
pgeo04144
Endocytosis
pgeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117449012 (itchb)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117449012 (itchb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117449012 (itchb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117449012 (itchb)
04121 Ubiquitin system [BR:
pgeo04121
]
117449012 (itchb)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117449012 (itchb)
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117449012 (itchb)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
HECT type E3
117449012 (itchb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117449012
NCBI-ProteinID:
XP_033942220
LinkDB
All DBs
Position
7:complement(33013642..33044105)
Genome browser
AA seq
922 aa
AA seq
DB search
MASGVTKPGPSNGHPMKAQLQIVVLSAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNT
HSPKWKQPLTVIVTPFSKLVFRVWSHQTLKSDVLLGMATLNVSDTLKSNEMKISEVVQTL
QLCADRDQSDVVGDLSVCLDGMTVDPEMFATAEADHHSTSNGDSQPNGDHVTRRSRDSSP
AVSVDGVEHRSSPSGRRSVHSAGSPSVSSGGSRPLRPPRPSRPPPPTPRRPASSPASSSN
GSATADGSDGQSGSDTPVRTPASGPSPAPGPSPAPGPSPAPGPSPAPGSSPSAGSERNST
AAPSSGAAAPSSGVAASSSGAAAPRQPASSVTPAVTPSVPAVSTGPLPPGWEQRVDQNGR
VYFVDHVEKRTAWERPEPLPPGWERRVDQMGRVYFVDHMTRTTTWQRPTMETVRNYEQWQ
HQRSQLQGAMQQFNQRFIFGLQEQVSATQNKEFDPLGPLPHGWEKRTDSTGRVYFVHHPT
RATQWEDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRATTYIDPRTGKSSLENGPQ
ITYVRDFKAKVQYFRFWCQQLSMPQHIKISVTRKTLFEDSFQQIMSFNAQDLRRRLWIIF
PGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFKFI
GRFIAMALFHGKFIDTGFSLPFYKRMLNKPLALKDLESIDPEFYNSLMWIKDNNIEECGL
EMFFSVDKEILGEVSTHELKPDGGELQVTEENKEEYIRLVAEWRLSRGVEEQTQAFFEGF
NEVLPQQYLQYFDAKELEVMLCGMQEIDLADWQRNTIYRHYARSSKQIVWFWQFIKEADN
EKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYK
SYEQMKEKLLFAIEETEGFGQE
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtggagtcaccaagccgggcccttccaacggtcaccctatgaaggcacagcta
caaatcgttgtgctatctgcaaagctaaaagagaacaagaaaaactggttcggccccagt
ccctatgtggaagtgacagtcgacggccagtccaagaaaactgagaaatgcaacaacacc
cacagccccaaatggaagcagccgctcactgtgattgtgactccgttcagcaaactggtg
ttccgtgtgtggagccaccagaccctgaagtccgacgtgttgctgggcatggccacactg
aacgtcagtgacacgcttaagtctaacgaaatgaaaatttctgaggtggtgcagacctta
cagctgtgtgcagacagagaccagtccgatgtggtgggagacctctccgtctgcctggac
ggaatgactgtcgaccccgagatgttcgccacggcagaggccgaccatcacagtacatca
aacggggattcccaacccaatggggatcatgtcacaaggcggagtcgagacagctcccct
gctgtgagcgtggacggtgtcgagcacaggtcttctcccagcggacggaggtcggtgcac
agcgcggggtctccctctgtgtcctcagggggctcgaggcctctaagacccccccggccc
tccagacctcctcctccaaccccgcgcagacccgcctcttcaccagcatcctctagtaat
ggctctgcaacagctgacggcagtgacggtcagtcgggttctgacacaccggttcgaaca
ccggcttcaggaccttctccggcaccaggaccctcacctgcaccaggaccctcacctgcc
ccaggaccctcaccggcccctggatcaagtccatcggcgggctcagagaggaactctaca
gcggcccccagctccggggctgctgcccccagctccggggtagcggcctccagctccggg
gctgcggcccccagacagccggccagcagcgtcacccctgctgtcactccgagtgtcccc
gctgtcagcaccgggcccctgcccccagggtgggagcagagggtggatcagaacggcagg
gtgtattttgtcgatcacgtggaaaagagaacggcgtgggaacgccctgaaccactgccc
cctggctgggagcgtcgtgtcgaccagatggggcgggtctactttgtcgatcacatgacc
cggaccaccacgtggcagcgccctaccatggagacggtgcgtaactatgagcagtggcag
caccagcgcagccagctgcagggggccatgcagcagttcaaccagaggttcatattcggg
ctacaagagcaggtctcagccactcagaataaggagtttgatcctctcgggcctctgcca
cacggatgggagaagagaacagactccactggcagagtttattttgtacatcaccctacg
cgagcaacacagtgggaggacccacgaacacagggtttgctgaatgacaagcctctccct
gagggctgggagatgaggttcactgtagacggtattccctacttcgtggaccacaacagg
agagcgaccacgtacatcgaccctcgcactggaaagtcctcacttgaaaacggacctcag
atcacctacgttcgagactttaaagccaaagtacagtacttcagattctggtgccagcaa
ctgtcaatgcctcaacacatcaagatcagcgtcaccaggaaaaccctgtttgaggactcc
ttccagcagattatgagcttcaatgctcaagatctacgaaggagactttggatcatcttc
cctggagaagaaggccttgactacggaggcgttgccagggagtggttcttcctgttgtcc
catgaagttttgaaccccatgtactgcctgtttgaatatgccggcaaagataactactgt
ctccagattaaccccgcctcctacatcaaccctgaccacctcaagtatttcaagttcatc
ggacgcttcattgccatggctcttttccacggcaaattcatcgacactggtttctcactg
ccattctacaagcgcatgctcaacaagcccctggccctcaaagacctggagtcgatcgac
ccggagttttacaactcgctcatgtggatcaaggataacaacatcgaggagtgcgggctg
gagatgttcttctccgtggacaaagagatcctgggggaagtctccacccatgagctgaag
ccagacggaggagagctccaggtgactgaggagaacaaggaggagtacatcaggctggta
gcagagtggaggctgtcccgaggggtggaggagcagactcaggctttctttgaaggcttc
aacgaggtcctccctcagcagtacctgcagtacttcgatgctaaagagctcgaggtgatg
ctgtgtggtatgcaggagatcgacctggcagactggcagagaaacaccatctacagacac
tacgctcgcagcagcaaacagatcgtctggttctggcagttcataaaggaggcggacaac
gagaagaggatgaggctgctgcagtttgtcacaggaacctgtcgcctgcctgtaggaggc
tttgccgaccttatgggaagcaatggtccccagaagttctgtatcgagaaggtgggaaaa
gaaaactggcttcccagaagtcacacgtgcttcaacagactggacttgccgccatacaag
agctacgagcaaatgaaggagaagctgctgtttgccatcgaggagacggaaggcttcgga
caggagtga
DBGET
integrated database retrieval system
