KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117449402
Entry
117449402         CDS       T09629                                 
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pgeo03037]
    117449402 (ift122)
Cilium and associated proteins [BR:pgeo03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   117449402 (ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122_C Beta-prop_EML_2 WD40 Zn_ribbon_IFT122 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz EIF3I WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd TPR_IF140-IFT172 Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd TPR_IFT80_172 Beta-prop_WDR19_1st TPR_GEMI5 Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_Vps41 TPR_7 TPR_COPA_B Beta-prop_SPT8 Beta-prop_WDR35_2nd Beta-prop_IFT140_2nd TPR_2 Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 117449402
NCBI-ProteinID: XP_033942950
LinkDB
Position
7:13443518..13472282
AA seq 1186 aa
MRAVLAWKETIREQCVYDLAFKPDGTQLIIAAGLRVLVYDVADGAIIQPLKGHKDIVYCV
AYAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVAYNPVTHQLASCSSGDFGLW
SPEQKSVNKHKVSSKITCCGWTNDGQYLALGMMNGVVSIRNKNGEEKVKIERPGGSSSPI
WSIAWNPSKDEHNDILAVADWGQKLSFYQLSGKQIGKDRPLTYDPCCVSYFSKGEYIVMG
GSDKQASLYTKDGVRLGSIGEQNAWVWTCRVKPDSNFVVMGCQDGTIACYQLIFSTVHGL
YKDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYRNRLAIQLPEKILIYELYSDD
SSDMHYRTKEKICRKFECNLLVVCSQHIILCQEKRLQCLSFTSVKEKEWVMESLIRYIKV
IGGSQGREGLLVGLKNGAILKIFVDNLFPITLLKLSTSVRCLDMSASRNKLAVVDEHNTL
LVYDINSKELLFQEPNANSVAWNTQCEDMLCFSGNGYLNIKASNFPVHQQKMQGFMVGYN
GSKIFCLHVYSMLAVEVPQSAPMYQYLERKMFKEAYQIACLGVTDSDWRDLATEALEGLD
FDTAKKAFIRIRDLRYLELINSIEERKKRGENDNELFLADVYAYQGKFHEAAKLYKRTGH
ESRALSMYTDLRMFDYAKDFIGGTDPKSSRILMTKQADWAKSSKEPRAAAEMYLSAGEHL
KAIDIIGEHGWEDMLIDIARKLDKAEREPLAKCALYFKKLKHHGYASETYSKMGDLQALL
QLHVETRHWEEAFSLVDKHPQFKNDVFVPYAQWLAENDRFEEAQKAFHMAGRQNEAVKVL
EQLTHNAVVENRFNDAGYYYWMLSMQCLDIARAESEDQRDEMLKKFERFQHLAELYHVYR
SIQRYTDEPFSSHMPETLFNICRFLLNNLTKDIPQGISKVNTLYALAKQSRRLGAYKLAR
YSYEKLQELHIPSRFQESIELGGLTIRSKPFHDSEDLIEGMMCYRCSTNNPLLNNQGSVC
INCRQPFIYSASSYEVLPLVQFYLEGGISDEEAVSLIDLEVPHTDQSDARWHDMDNGEMQ
ALKMKDDLDDHEEDPFTAKMSFERGGSTFVPVKVSRLVLRSMSRRDVLIKRWPRPLKWEY
FRSLLPDVSITMCPTCFKMFHSEDYELLVLQHNCCPYCRRPIDEPN
NT seq 3561 nt   +upstreamnt  +downstreamnt
atgagagccgttctagcgtggaaagagacaattcgtgaacagtgtgtatatgaccttgcc
tttaagccagatggtacccaactcatcattgccgcggggcttcgtgtcctggtttatgat
gtggcagatggagctataatccagcctttaaaaggacacaaagacatcgtgtactgtgtg
gcctatgctaaagatgggaagaggtttgcttcagggtcagcagacaaaagcatcattatc
tggacctcgaaactggagggtattttaaaatatactcacaatgactctatccagtgcgtt
gcctacaaccctgtcactcaccaacttgcctcctgctcttctggtgacttcggtctatgg
tcccccgaacaaaaatctgtgaacaaacataaagttagcagcaaaataacatgttgtggg
tggactaacgacggacagtaccttgcccttggcatgatgaatggagtggtgagcattcgg
aacaagaatggagaggagaaggtcaagatagagcgcccaggaggctcctcttctcctatc
tggtccatagcctggaacccctccaaggatgagcacaatgacattctggcggtggcagac
tggggtcagaagctgtccttttatcagctcagtggaaagcagattggaaaagacagacct
ctcacctatgacccttgctgcgtcagctacttctcaaagggcgagtatattgtcatgggg
ggctctgacaaacaggcctccctctacactaaagacggcgtgcggctgggctccatcgga
gagcagaacgcctgggtgtggacgtgccgggttaagcctgactccaactttgtggtgatg
ggctgccaggatgggaccatcgcctgctaccaacttatcttcagcacagttcacggcctc
tacaaggatcgctatgcttacagagacagcatgactgatgtcattgtccagcacctcatc
actgaacaaaaagtgaggataaagtgccgtgagctcgtgaagaagatcgccatttacaga
aaccgtcttgctatccagctgcccgagaagatcctcatctatgagctctattcagacgac
tcctccgacatgcactaccggaccaaggagaagatttgcaggaagtttgaatgcaacctg
ctggtggtgtgctcccagcatatcatcctgtgtcaggagaagagactccagtgcctgtcc
ttcaccagtgtcaaggaaaaagaatgggtgatggagtctctaattcgctacatcaaagtg
atcggtggttcgcaaggcagagagggtctgctcgtggggttaaagaatggagctatcctg
aagatttttgttgacaacctgtttcccatcacactgctgaagctgtcaacgtcagtgcgc
tgcctggacatgagcgcatcccgcaataaactggctgtggtggatgagcacaacactctc
ttagtctatgacatcaacagtaaagagctgctttttcaggagcctaatgcgaacagtgtg
gcctggaacacccagtgtgaggacatgctgtgcttctctggtaatggctaccttaacatt
aaggctagcaactttcctgtccaccagcagaagatgcaaggctttatggtcggctacaat
ggctctaagatcttttgtctccacgtctattccatgttggctgtggaggtgcctcagtca
gcgcccatgtaccagtacctggagaggaagatgttcaaggaggcctaccagatcgcctgt
ctcggagtgactgacagtgactggagggatttagccacagaggccctggagggacttgac
tttgacaccgccaagaaggccttcattagaatcagagacctgcgctacctggaactcatc
aatagcattgaggagaggaagaagcggggtgagaacgacaatgagctgttcctggcagac
gtctatgcctaccaggggaaattccatgaggcagccaagctctacaaacgtactggccac
gagtccagagccctgagcatgtacactgacctgcgcatgttcgactacgccaaggatttc
attggagggacagaccctaagagctctcggatcctgatgaccaagcaggcagactgggct
aagagcagcaaggagccgcgggcagcagcggagatgtacctgtcagcaggagaacatctc
aaagccatcgacataataggggaacacggctgggaagacatgttgatcgacatcgctcgt
aaattggacaaggccgaacgtgaaccgctggcaaagtgcgcgttatacttcaagaagctg
aagcaccacggctatgcctcagagacttactccaagatgggggacttgcaggctctactg
cagctgcatgtggaaacccggcattgggaagaggctttctcactggtggacaagcaccca
cagttcaaaaatgatgtctttgtgccttatgctcagtggttggctgagaacgaccgcttt
gaggaggcacaaaaagcatttcacatggcagggcgacagaacgaagcagttaaagtcctt
gagcagcttacccacaatgcagtggtggagaacaggttcaacgatgcagggtactattac
tggatgttatcaatgcaatgtctagacatcgctcgagcagaaagtgaagaccagagggat
gaaatgctgaagaagtttgagcgttttcagcatcttgctgagctctaccatgtctaccgc
tccattcagcgctacacggatgagcccttcagttcccacatgccagagacactcttcaac
atctgcaggttccttctgaacaacctcaccaaggacataccgcaaggcatttccaaagtc
aacaccttgtatgcattggccaagcagagtcgaaggctgggggcttacaagcttgccagg
tattcctacgagaaactccaggagctgcacatcccctctcgcttccaggagtccatagaa
ctgggcggcctcaccattcgctccaaaccctttcacgacagcgaggacctcatagagggc
atgatgtgctaccgctgctccaccaacaaccccctgctgaataaccaggggagcgtgtgc
atcaactgcaggcagcctttcatctactcagcctcgtcatatgaggtgttgcctctcgtg
cagttctacctggaggggggcatcagtgatgaagaggcagtttctctgatcgacttggag
gtccctcacacggatcagagtgacgcacgctggcacgatatggacaacggtgagatgcaa
gctttgaagatgaaggatgatttggacgatcatgaggaagacccatttacagccaaaatg
agctttgagcgggggggctcgacctttgtcccagtgaaggtgagtcgcttggtgctgcgc
tccatgagcaggagggacgtcctgatcaaacgctggccccggccgctcaaatgggaatac
ttccgctccctgctgcccgatgtgagcatcacaatgtgccccacctgcttcaagatgttc
cacagtgaggactatgagctcctggtgcttcagcacaactgctgtccttattgtcgccga
cccatcgatgaaccaaactga

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