Pseudochaenichthys georgianus (South Georgia icefish): 117449490
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Entry
117449490 CDS
T09629
Symbol
ap4b1
Name
(RefSeq) LOW QUALITY PROTEIN: AP-4 complex subunit beta-1
KO
K12401
AP-4 complex subunit beta-1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117449490 (ap4b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117449490 (ap4b1)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Golgi transport
Others
AP-4 complex
117449490 (ap4b1)
BRITE hierarchy
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
HEAT
B2-adapt-app_C
PDS5
Motif
Other DBs
NCBI-GeneID:
117449490
NCBI-ProteinID:
XP_033943094
EnsemblRapid:
ENSPGEG00000020471
LinkDB
All DBs
Position
7:40944620..41002018
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AA seq
828 aa
AA seq
DB search
MPYLGSEDTERELRRALCNPHIQSDPLRYRNTVLKVLRAMSQGVDVSGLFSEMVKACATA
DIVQKKLVYVFLCSYAALNPELSLLVINTLRKDCQDPNPMVRSLALRNMTNLRLPSLVEY
VEQPLTAGLRDRAACVRRVAVLGWAKIHNLQPNSETDAAVVNELYTLLRDPDPVVMVNCL
RALEEILKEEGGVAINKPITHHLLNRLKECDVWGQCEVLRVLQRYRPQTEDELFDILSLL
DASLVSPHPPVMAATLSLFLGLCSALPAVGLAALERVRAPLLTACGSPSREMRLTALCHI
QLLLRSLPGLMGAHYKRFFCGYAEPAYIKQRKMQVLVELVNDDNVAMILDELRGYCTDVN
TDTAQAAISAIGGIGRSYSDRCLEILTGLLGLKQEHITSAVVQTMRDLVWVCPQCSDTVC
EALEGCEDTLQDSQGRQALLWLLAVYGERVSSAPYTLEVFIDGVRSETSVGVKMELLTTT
MRLFLCRPAETQDMLGRLLHYCIEEETDMCVRDQGLLYYRLLHRGIEETQKVLQGRRSDP
SLGVLIGRPAEPVSQWACSFNTLDPLKQGPVETEPHSRGSPEHVTFDPKPNTDLSETLDC
SQIVKLHSASDRARGCSDSSAEGLASSVAPPLSLSLTPVLSPEDFERLWLQRQDLHTEQD
AEKREEEEDCACLVEHIRGPAIAHCSPQSLQAAMQLVNIQTLAFTPPHTLPWRVYLFTHT
QHXHSGNAPHSTLIVGELLYTGEANQGVGVVKTGSDDGELGXEGSKEEHVREGGDRISAG
LRESARENXRKEEEVKVTLKQQPRDDIALKGFLSILTTVLHTLSSERA
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatctgggcagtgaggacacggagcgggagctgaggagggctctgtgtaacccc
cacatccagtccgacccgctgcgataccggaacaccgtgctcaaggtcctccgggcgatg
tctcagggtgtggatgtgtccggcctgttcagtgagatggtgaaagcgtgtgccacagcg
gacatcgtccagaagaaactggtctacgtgttcctgtgttcctacgccgctctgaacccc
gagctgtctctgctggtcatcaacacgctgaggaaggactgccaggaccccaaccccatg
gtgcgcagcctggccctcaggaacatgaccaacctccggttgcccagtctggtggagtat
gtggagcagcctctgactgcaggcctaagggacagagcggcctgtgttcgacgcgtggct
gtcctcggctgggccaaaatacacaacctccaacccaactctgagacagacgccgcggtg
gtgaatgagctgtacaccctgctgagggacccagaccccgtggtgatggtgaactgtctc
cgagctctggaggagatcctgaaggaggaggggggggtggctattaacaaacccatcacc
catcacctgctcaacaggttgaaggagtgtgacgtttggggtcagtgtgaggtcctgagg
gtcctgcagcgctaccggcctcagaccgaggacgagctgtttgacatcctgtccctgctg
gacgcctcgctagtcagcccccacccccccgtcatggccgccaccctcagcctcttcctg
gggctctgctcggccctgcctgctgtcgggctggcggccctggagcgagtgcgggccccc
ctgctgactgcctgcggaagcccctccagagagatgaggctcaccgccctgtgccacata
cagctgctgctgcggtctctgcctggcctgatgggggcgcactacaagcgtttcttctgt
ggctacgcagagccagcctacatcaagcagaggaagatgcaggtgctggtggagctggtg
aatgatgacaatgttgcaatgatactggacgagctgagagggtactgcaccgacgtgaac
actgacaccgcccaggctgccatctcagccataggtggaattgggcggagctacagcgac
agatgtctggagatcctcactggactgctggggctcaaacaggagcacatcacttctgcc
gtggtgcagaccatgcgagacctggtgtgggtgtgtcctcagtgcagcgacacggtgtgt
gaggctctggagggctgcgaggacacgctgcaggacagtcagggcaggcaggccttgctg
tggctgctggctgtgtatggggagcgggtctccagcgccccatacacgctggaggtgttc
attgatggagtgaggagcgagacgtctgtgggagtcaagatggagctgctgaccaccacc
atgaggctgtttctgtgccggcctgctgagacgcaagacatgctgggaagactgttgcac
tactgcatagaggaggagacggacatgtgcgtgcgtgaccaagggcttctctactaccgc
ctgttgcatcgtgggatagaagagacacaaaaggtcctccagggacggaggtcagaccct
tccctgggtgttctgattggccgccctgcggagcccgtcagccagtgggcgtgcagcttt
aacactctggaccctctgaagcagggccctgtagagacagagccccacagcagaggaagc
cctgaacatgtgacctttgaccccaagcctaacaccgacctctcagaaacactggactgt
agtcagattgtgaagcttcattcagcctcagacagagcccgtgggtgttcggactcctcg
gctgagggactggcatccagtgtagcccccccgctcagtttgtccctcactccggttctc
agcccggaggattttgagcgtctgtggctgcagcgacaggatttgcatactgagcaagat
gctgagaagcgagaagaggaggaggattgtgcatgtcttgtggaacacatccgaggccct
gcaatagcacactgctcccctcaaagccttcaggctgcaatgcagctggtcaacatccag
acactggccttcaccccgccgcacacactcccttggagggtgtacctgttcacacacacc
cagcacnnacacagtggcaacgcaccacacagcacgctcatagtcggggagctgctgtac
accggagaggcaaatcagggggtgggggtggtaaagacaggctcagatgatggagaactt
ggtnnggagggcagcaaagaggagcatgtgagagagggaggagaccgcatatctgctggg
ctgagagagtctgccagagaaaatnggagaaaggaggaggaagtgaaagtgactctgaag
cagcaaccaagagatgacatcgctctgaagggttttctctccatcctcaccaccgtactg
cacacactgtcctcagagagggcgtaa
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