Pseudochaenichthys georgianus (South Georgia icefish): 117449715
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Entry
117449715 CDS
T09629
Name
(RefSeq) U8 snoRNA-decapping enzyme
KO
K16855
U8 snoRNA-decapping enzyme [EC:
3.6.1.62
3.6.1.64
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00230
Purine metabolism
pgeo01100
Metabolic pathways
pgeo01232
Nucleotide metabolism
pgeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
117449715
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117449715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117449715
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
117449715
3.6.1.64 inosine diphosphate phosphatase
117449715
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
117449715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nudt16-like
NUDIX
Motif
Other DBs
NCBI-GeneID:
117449715
NCBI-ProteinID:
XP_033943441
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Position
7:34968885..34973967
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AA seq
219 aa
AA seq
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MASGKLSRAGALACSGCRHACHVMLYCDTKTQLFGRIPIRHIILMQMRFDGLLGFPGGYV
NPSEETLEAGLSRELLEELGVALPISAEDHVDCCHAPASSPSSPSRLISHFYVKKMEEEQ
IKEVEKEAASTATDHGQEVLGMVRVPLYNTKNGGGLAPFLSHSFIGSARSQLVDSLLRLD
MIAPEELHKALAHSLKIHTHTAEDLQAALMRTEAKRNWF
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtggaaagctgtccagagctggggcgttggcgtgctcaggctgcaggcatgcg
tgtcacgtgatgctctactgtgacacgaaaactcagctgtttgggagaattccaatcaga
catatcatactgatgcagatgcgctttgacggtctgctgggtttccctggagggtatgtt
aacccttcagaggagactctggaggcggggcttagcagggagttgttggaagagctgggc
gttgctcttcctatatcagcagaggatcatgtggactgctgccatgcccctgcttcctcc
ccctcctccccctcccgtcttataagtcacttctatgtgaagaagatggaggaggagcag
ataaaggaggtggagaaagaggctgcatccactgcaaccgatcatggacaggaggttctg
gggatggtcagggtccctctctacaacacgaaaaacggcgggggcctcgcgcctttcttg
tcgcactcattcatcggcagcgctcgctcgcagctggtggattctctgctgcgcctcgac
atgatcgcccctgaggagctgcacaaagccctcgcgcattctctaaagatacacacacac
accgctgaggacctgcaggcggctctgatgcgaacagaggcgaagaggaattggttctga
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