Pseudochaenichthys georgianus (South Georgia icefish): 117449828
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Entry
117449828 CDS
T09629
Symbol
plxnd1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
117449828 (plxnd1)
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Motif
Other DBs
NCBI-GeneID:
117449828
NCBI-ProteinID:
XP_033943613
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All DBs
Position
7:complement(13477525..13544892)
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AA seq
1897 aa
AA seq
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MPPSIEIAVLLLGVLALETHRSASALHIQQAFASPNQTNNFAVDPVSRKVYLATVNTVYQ
LNGTLSIEVEQRTGPVEDNLLCHAPQLPQAPCEHPKSLTDNHNKLLKLDRDQGVVLVCGS
VYQGFCELRNIENISEIAVEFPHQGEKTVFPSMLNIAANHPNASTVGLIFKSHGGNTRLL
VGATYTGAGTQFFPKNHSKEDLRFENTPEIAIRSLNIKDLSRLFTYDINPSEDNVFKIKQ
DVKTKNKLNFVHAFMQKTYSYIAFNNDAKMGHKESLPNSILARICLDTENPRKPSGPESR
KLTESYIQMPLQCGFNGNIYNRLLSVYPAEIPTEDGKSSEPYLFGVFSKADRKSALCAFK
FGDIDEEIRQGRRNCSNSPSSDVQVLDSVIQGSGAACIQKGNLVLQPDQLDCGAAHLQHP
LALRRSLRAIPLVEYTGLTSVSVDNVHNHTVVFMGTSNGRLRKLTLLANMTLRNQWTLKL
PASEAVHHIMTFDPNDRNFLYLMTSHHMLRVRVADCDQWTSCGECLGAGDAHCGWCTLEN
RCTIQKECAQGLLARSWISMGEGPQQCPSMTLTPPEISIAADIKDVGILINGSVPDLVNS
RVECEYGPGVSTAATVHLDYGPAQIQTCPLLPRENYQPIRPGTDHLTVSVAIKVNGTSVV
SGSFIIYDCKRTGAIHPKTSCLSCLSTRWKCYWDPENHLCVSNKDELKHSLLENAASCPS
LVASEVPPSPSEMAQDFTLSLSNIQENEELECDFGTEQRYEATWLNSSTVKCSGVALSTT
HRSQVYHLNLRRKGYFSGNGDDVFVDSPQPMRVEVYNCGVGSSDCSQCWGREDQGHLCGW
CTNSCRPRDDCQPIRDQCPAPEIHKISPLRGPVEGGTLLTVQGRNLGRRAAAVKVSIGDV
PCILLPELYTVSVEMVCVTGQSSQERTDIVEVDVDQSGIGPSKESFSYLIPKLQSLEPTK
GSRAGGTIVIISGENLDIGSQVRVKVNNTLECTITDKTDETIECTMPPALQAHTESVAVC
VEFENLPCQSAELSTSYTYQKNPTISFIHPKKSYLSGGRTITVTGQGFDLVQSVNMEVME
IGEKRCSVVSPFTITCPSPASSQSQQTTAQFILNGVLYTGDNPFTFDSDEEDGEPHKGHF
PLEYVEDPQFFTASKEKLIKHHPGEPLTLIINKGPSDLELMPEEYSVMIGSYPCNISFHN
DQLFHCTINGLLSSNENELPVTVQVGNFRHTIAIVQLGGSELAIVVSIVVCCVLLLLCTV
ALVVYCTKSRRAERYWQKTLLQMEEMESQIRDEIRKGFAELQTDMTDLTKELNRSQGIPF
LEYKQFVTRTFFPKMFSDYEKSLVQPAFEYDGLGPRVLPETHPLLQDWQENNTTKPNVEE
GITLFSTLLNNKHFLVTFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTSIMKDLLV
DLIDASAAKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIKQQINKG
SIDAITGKARYTLNEEWLLRENIEAKPQNINVSFQGCGMDSISIKVMNTDTISQVKEKIL
EAFYKNLPFSQWPRAEDVDLEWFDSGSNSKVLQDLDNSTLMEDGRKKLNTVFHYQIPEAA
SLAMSMKDKRDNTLGRVKDLDTEKYVHLVLPHDDQNDHKRSHRTSHRKKVLPEIYLTRLL
STKGTLQKFLDDLFQAILSIPQDRPPLAIKYFFDFLEEQADKRGITDPDTLHIWKTNSLP
LRFWVNILKNPQFVFDIDKTDHMDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYAKEI
PEYKKRVQCYYKQIQDMPPLSEQEMNAHLAEESRKYRNEFNTTLALTEIYKYAKKYRTQV
VTALESNPTARRTQLHHKFEQVIALVEDNIYECCSEA
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcgatagagatagctgttctgctcctcggcgtcctggctttggagacgcac
cggagtgccagcgcgctgcacatccaacaggcgttcgcgtctccaaatcagaccaataac
ttcgcggtggacccggtgtccagaaaggtatacctggccaccgtcaacacagtctaccag
ctgaacgggaccttgagcatcgaggtggagcagaggactgggccggtggaggacaacctg
ttgtgccatgcgccacagctgccccaggctccgtgcgagcatcccaaatccctcactgac
aaccacaacaagctcctgaagctggaccgggatcaaggggtcgtgctggtgtgtgggtcc
gtctatcaaggcttttgtgagctcagaaatatcgagaatatttcggagatagctgtggag
ttcccacatcagggcgagaagactgttttccccagcatgctgaacattgctgccaatcac
ccaaacgcatccacggtgggtctgatctttaagagccacgggggaaacacccggcttctc
gtcggggccacttacactggggctggtacccagtttttcccaaagaaccacagcaaggag
gacctgcgctttgagaacacaccggagatcgccatccgctccctgaatattaaggatcta
tcccggcttttcacctatgacattaacccttcagaggataatgtattcaagatcaagcaa
gatgttaaaactaaaaacaagctgaacttcgtacacgctttcatgcagaagacttattcc
tacattgcctttaataatgacgcgaaaatgggccacaaggagagcctgcccaacagcatc
ctcgccaggatatgtctggacaccgagaacccccgaaaacccagcgggccggagagcagg
aagctcactgaatcctacatccagatgccgctacagtgtggatttaacgggaacatttac
aaccggctgctgtccgtttaccccgcggagatccccacagaagacgggaagagttccgag
ccctacctgtttggagtgttttccaaggcggacagaaagtctgctctgtgtgctttcaag
tttggagacatcgatgaggagatccgacaaggccgcaggaactgctccaactctcccagc
agcgatgtccaagtgctggacagcgttatccagggctccggggcagcctgcatccagaag
ggaaacctagtgttgcagcccgatcagttggactgcggggcggcccacctccagcacccc
ctggccctgcggaggtccctgagggccattcctctggttgaatacacgggcctaacttca
gtctctgtggacaatgtgcacaaccacactgtggtgttcatgggaaccagtaacggacga
cttcgtaagctgaccctcttggcgaacatgaccttgagaaatcaatggacgctgaagttg
ccagcaagtgaagcagtccaccacatcatgaccttcgaccccaacgacaggaacttcctt
tatctcatgacttctcaccatatgctcagggtgagagtggccgactgtgaccagtggacg
agctgcggtgagtgtttgggagccggcgacgcccactgtggctggtgcactctggagaat
cgatgtaccatccagaaggagtgcgctcaggggctgttggcccgctcctggatcagcatg
ggtgaaggcccgcagcagtgtccgtccatgaccctgacacccccggagatcagcatcgct
gcagacatcaaggatgtcggcattctgataaatggcagtgttcctgatctggtgaactcc
cgggtggagtgtgaatatgggccgggtgtttctacagctgccacggtgcacctggattac
ggtcccgctcagatccagacctgccccctgctgcctcgagaaaactaccaaccaatccgc
cccggcacagatcatctgactgtttctgtggcgataaaagtgaatggcacatctgtggta
tctgggagcttcatcatctacgactgcaagaggaccggagccatacaccccaagacatcg
tgtttgagctgcctgagcaccaggtggaagtgctattgggaccccgagaaccacctatgc
gtctccaataaagacgagttaaagcacagcctgctggagaatgcggcttcctgtccaagc
ctggtggcctcagaggttcctccatcaccttcagaaatggcccaggacttcaccttatcc
ctcagcaacattcaggagaatgaagagctggagtgcgactttgggacagagcagcggtac
gaggccacctggctgaacagctccacggtgaagtgcagtggagtagcactgtccactact
caccggagccaggtttaccacctcaacctgaggaggaaaggatacttcagtggaaatggg
gacgatgtctttgtcgacagccctcagcccatgagagtggaagtgtacaactgtggagta
gggagctccgactgctcccagtgctggggccgggaggaccagggccacctctgcggctgg
tgtacaaacagctgcaggccgagggatgactgccagccaatcagagatcaatgtccggct
cctgagatccacaagatctccccgctgaggggtccagtggagggaggcaccctgctgaca
gtacagggcaggaacctgggccggagggcggcagcagtaaaggtctctattggcgatgtg
ccgtgtattctcctgcctgagctctacaccgtctctgtggagatggtgtgtgtcactgga
cagtcttcacaggagaggacggatattgtcgaagtggatgtggaccaaagtgggattgga
ccgtcaaaggagagcttctcgtacttaatcccaaaactgcagtccttggagccaacgaag
ggctcccgagcgggaggaactatagtcatcatcagcggggaaaacctggacattggctct
caggtcagagtcaaggtcaacaacacactggagtgtaccatcacagacaaaacagatgaa
accattgagtgcaccatgcctccggccttacaggcacacactgagtcagtggcagtgtgt
gtggagtttgaaaaccttccctgtcaaagtgcagagctgagcacctcctacacctaccag
aagaaccccaccatcagcttcatccaccccaaaaagagctacctcagtggaggccggacc
atcacagtgacgggtcagggttttgatctggtgcagagtgtcaacatggaggtgatggaa
attggagaaaaacgctgctcagtggtctctcccttcacaatcacctgcccctccccggca
tccagccagtcccagcagaccaccgcgcagtttatcttgaacggagtcctttacacaggc
gacaaccccttcacctttgatagcgatgaagaggatggggagcctcataaaggtcacttc
ccgttggagtacgtggaagacccccagttcttcactgccagcaaggagaagctgattaaa
caccacccaggagagccactgacactcatcatcaacaaaggaccgagcgatctggagctg
atgccggaggaatactcagtgatgattggctcgtatccctgtaacatcagcttccacaac
gaccagctgttccactgcaccatcaatgggctgctgagctccaacgagaacgagctccct
gtcactgtgcaagtggggaactttcgtcacaccatcgccatagtgcagctcggaggcagc
gagctggccatcgtggtgtccattgtggtgtgctgcgtgctgctgctgctgtgcactgtg
gcccttgtagtgtactgcacaaagagccggagggcagagcgctactggcagaaaacacta
ctgcagatggaggagatggagtcacagatcagagatgagatccgtaaaggctttgcagag
ctccagacggacatgacagacctgaccaaggagttgaatcgcagccagggcatccccttc
ctggagtacaaacagtttgtcacgcgcacgtttttccccaagatgttttcggattacgag
aagagtctggtccagcctgccttcgagtatgatggcctgggccctcgagtgctgccggag
acccacccgctgctgcaggactggcaggagaacaacacgaccaagcctaacgtagaggag
ggcatcactctgttctccactcttctcaataacaaacacttcctggtcacgtttgtccac
gccctggagcagcagaaggacttcgctgtacgagacagatgcagcctggcgtctctgctc
accatcgctcttcatggaaagctggagtactacaccagtatcatgaaggatctgctggtg
gacctgattgatgcttcggctgccaagaaccccaaactgatgctgcgccgcactgagtcc
gttgtggagaaaatgttgaccaactggatgtctatctgcatgtacagctacctcaaggaa
acggtgggcgagcctttcttcctgctgctctgtgcaatcaagcagcagatcaacaagggc
tccatagacgccatcacagggaaggcccgctacaccctcaatgaggagtggctgctgcgc
gagaacatcgaggccaagccacagaacatcaatgtctccttccaaggctgtggcatggac
tcaatatcaatcaaggtcatgaatacagacacaatcagccaggtgaaggaaaaaatctta
gaagccttttacaaaaacctgccattctcccagtggccccgagcagaggatgtagacctg
gaatggtttgactctggcagcaacagtaaggtcctgcaggacctggataactccacattg
atggaagacggccggaagaagctcaacacggtcttccattaccagatccccgaggcggca
tcgctggccatgagcatgaaagacaagagagataacacccttgggagagttaaagatctg
gataccgagaagtatgtacacttggtcctacctcatgatgatcaaaatgaccacaagagg
tcacacaggacgagccaccggaaaaaggtccttcctgaaatctacctgacgcgcctgctg
tcgactaagggaactcttcagaagttcctggatgacctctttcaagccatcctcagcatc
cctcaggaccgcccccctctggctatcaaatacttctttgacttcctggaggagcaggct
gacaagcggggcatcacagacccagacaccctgcacatctggaaaaccaacagtttacct
ctgcggttctgggtgaacatcctgaagaatcctcagtttgtgtttgacatcgacaagacg
gaccacatggacgcctgtctgtctgttatcgcccaggccttcatagatgcctgctccatt
tctgacctgcagctcggaaaggactcccctaccaacaagctgctgtatgccaaggagatc
ccagagtataagaagagagtgcagtgctactacaagcagatacaggacatgccacctctt
agcgagcaggagatgaatgctcacctggctgaggagtcacgaaaatacagaaatgaattc
aacaccaccctggccttgacagaaatctacaaatatgccaagaaatacagaacgcaggtg
gtgaccgctctggagtcgaaccctacagcacgtcgcactcaactgcaccacaagttcgag
caggtcattgcccttgtggaggacaacatctacgagtgctgcagcgaagcctga
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