Pseudochaenichthys georgianus (South Georgia icefish): 117451485
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Entry
117451485 CDS
T09629
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00514
Other types of O-glycan biosynthesis
pgeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117451485 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117451485 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pgeo01003
]
117451485 (lfng)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
117451485 (lfng)
Glycosyltransferases [BR:
pgeo01003
]
Glycan extension
O-Glycan
117451485 (lfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
117451485
NCBI-ProteinID:
XP_033945702
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All DBs
Position
8:complement(12884628..12892239)
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AA seq
369 aa
AA seq
DB search
MFKNNGKKTAITVASTACLCMLLLLLAVQHLRVQVEDEGAKGEDAGTRSLLQDAAREKEQ
DAKTKKGFSAYFTKLTRSRRDVEKPARSASAEAPPAEDISANDIFIAVKTTKKFHQSRLN
LLLDTWISRNIPQTYIFTDGEDEDLKKKIGSHAINTNCSAAHSRQALSCKMAVEYDKFIE
SGKKWFCHVDDDNYVNVRTLVKQLSQFPHTQDMYIGKPSLDRPIEATERLGDNKMKPVNF
WFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTVGYIIESVLGVPLTRSSL
FHSHLENLQQVSRSEIHKQITLSYGMFENKSNIINLKGAFPVEEDPSRFKSVHCLLYPDT
PWCPPQVAF
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaataacggaaagaagaccgctataactgtagccagcacagcctgtctgtgc
atgctgctgctgctgctggcggtgcagcatctccgggttcaggtggaggatgagggggcg
aagggagaagatgctggaacccgctctcttctccaggatgccgctcgggaaaaagagcag
gacgccaaaactaagaaaggattctcggcgtacttcaccaaactgacccggagtcggagg
gacgtggagaagcccgcgcgctcagcgtccgctgaggcgcctccagctgaggacatcagc
gctaatgacatcttcatcgctgtgaagaccaccaagaagttccaccagtccaggctgaat
ctgctcctggacacctggatctcaagaaacataccacagacatacatcttcacggatgga
gaggatgaggatcttaaaaagaaaattgggagtcacgccatcaacaccaactgctctgca
gctcatagtcgacaggcgctgtcttgcaagatggcggtggaatatgacaagttcatagag
tcggggaaaaagtggttctgtcacgtagatgacgacaactatgtgaatgtgaggactctg
gtgaagcaactgtcccagttcccccacacccaggacatgtacatcggtaagcccagcctg
gaccggcccatcgaggccacagagaggctgggggacaataagatgaaaccagtcaacttc
tggtttgccactggaggagccggcttctgtgtgagccggggtctggcgctgaagatgagc
ccatgggccagtggcggtcacttcatgaacacagcagagaagatccgcctgcccgacgac
tgcaccgtgggctacatcatcgagtcggtcctgggggtccctctgacccgcagcagcctg
ttccactcccacctggagaacctgcaacaggtgtcaagatctgagatacacaaacagatc
accctcagttatgggatgtttgaaaacaagagtaatatcattaatctgaaaggagctttc
cctgtggaggaggatccatcaaggttcaagtcagtgcactgcctcctgtacccagacacc
ccgtggtgtccccctcaggttgccttttag
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