Pseudochaenichthys georgianus (South Georgia icefish): 117453606
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Entry
117453606 CDS
T09629
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117453606
Cell adhesion molecules [BR:
pgeo04515
]
Cadherins
Protocadherins
117453606
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
117453606
NCBI-ProteinID:
XP_033948380
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Position
10:complement(20804653..20807298)
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AA seq
822 aa
AA seq
DB search
MTKTIGYRDWRWQALWWHHFFLLWTTINGQTRYSIPEELKQGSVVGNLAKDLSLGLSDIL
DREMHIASEAGEQYFSVDAAKGELVVNDRIDREALCGQSASCVLTLQVVVQNPLQSHRIE
VEIRDINDNSPNFLTQEINLKIPESVALGRRFPLESAKDPDVGSNSLKTYSLSKNDYFSL
KFKDTKNGKAVPELVLEKPLDREKTALHQLLLTALDGGNPVKSGTCTIIITVLDNNDNFP
IFNENEYKVSLKENSTKGTFVIKLKATDADDGVNGEVKYYFGSRTPDFVLSTFDINEITG
QIILKSALDYESAKSYLIDITAKDRGIPEMEGNCRVQLDVEDINDNAPEIVLTSKPGPVP
EDAPSGTVVALISARDFDSGNNGRVTLQLPKRSPFTLKPSYSNNYQLVTSGALDRESFSE
YNIEITATDSGSPPLSSKKSIPISISDVNDNAPLFTQPSYNVYLKENGVPGSILYSVSAS
DLDFGENAKISYSILESKVQGVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPSLSSNTTVHVFILDQNDNAPAVIYPSSAILGSLSHQRMSRSAKAGHLVTKVTAVDAD
SGHNAWISYKLAEATDASLFTVNLYTGEVRTKRAASEQDDSSQRLLIEIKDDGEPMQSAT
VTVSILLEDGLHEPILDLRQKAAEPSRKTGRITLYLILSLASVSVLSLVTFLILAVKCMR
NSSSSGSCCMRRSDCDNYKNPNRNMQIQLNTDGPIKYVEVLGGDMMSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFTEVINVLDASLPDSTWTFESQQVSRR
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagacaataggataccgagactggagatggcaggcgctttggtggcatcatttc
tttctcttgtggactacaataaacggacagactcggtacagcatcccggaggaactgaaa
cagggctctgttgtaggaaatctagccaaagatctgagtctcggactatcagacatttta
gatcgtgaaatgcatatcgcctctgaggctggagagcagtatttcagtgtggatgcagcg
aagggcgagcttgtggtgaatgacagaatagacagagaggctttatgtggacaaagcgcc
agctgtgttttaactctgcaagtagttgttcaaaatcctttgcagtctcatcgtattgaa
gtggaaattagagatataaatgacaattctcctaattttcttacacaggaaattaacctt
aaaataccagaatcagtggctcttggcagacgttttcccttggaaagtgcaaaagaccct
gatgttggaagcaattctttaaaaacgtactccctgagcaaaaacgattatttttctctt
aagtttaaagacacaaaaaacggtaaggctgtaccagaattggtgttagaaaagccattg
gaccgggaaaagactgctctccatcagcttttgttgactgcattagatggaggtaaccct
gttaaatctggaacctgtactattattatcactgtacttgataacaatgacaattttcca
atattcaatgaaaatgagtacaaagtgtctttgaaggagaacagcaccaaaggaacattt
gtgatcaaacttaaagctacagatgcagacgacggtgttaatggtgaagttaaatattat
tttgggtctcgcactccagactttgtcttatcaacatttgatattaatgaaataacagga
caaatcatattaaaatcagcattagattatgagagtgctaaatcataccttatcgatata
actgctaaagacaggggcattcccgaaatggagggtaactgtcgtgtacagttggacgta
gaggacataaatgataatgctccagaaattgtgcttacatcaaaacctggtcctgtgcct
gaggacgcaccaagtggcacagttgtggctttaatcagtgcacgagactttgactcagga
aataacggtagagtgacgttacagcttccaaaacggtctcctttcactctgaaaccgtcc
tactctaataattaccagctggtcactagtggtgctttggaccgagagagtttctcagaa
tataatattgagataacagccactgattcaggctctcctcctctgtccagtaagaaaagc
atacctatcagcatcagtgatgtgaatgataacgcccctttattcactcagccatcctat
aatgtgtatttaaaagagaatggggtgccaggctctatactgtattcagtatcagcgtct
gaccttgattttggtgaaaacgctaaaatctcctactccatcttggaatctaaagtgcag
ggcgtgtctgtctcgtcttatgtttacattaactcagataacggcagcatctacagcatg
cactcgtttgactatgagaaactgaaggtgtttcagatccaggttcaggcaaaggatcag
ggctctccgtctctcagcagcaacaccactgtccatgtttttatcctggaccagaacgac
aatgcccccgctgttatttacccctcctccgctatcctgggctccctctctcaccagagg
atgtcccgctccgctaaagcgggtcacctggttactaaggtgacggccgtggacgctgac
tcgggccataacgcctggatctcctacaaactggcggaggccacagacgcctctctgttc
actgtcaacctgtacacaggggaggtgaggactaaacgtgctgcgtccgagcaggacgac
tcctctcagaggctgcttatagagatcaaggacgacggggaaccgatgcagtccgccacc
gtcacggtgtccatcctgctggaggacggcctccatgagcccatcttagacctccgacag
aaagcggccgagcccagcaggaaaactgggagaatcaccctgtatttgattctctctctg
gcctcggtgtccgtgctgtctctggtgacttttctcattttagcggttaaatgcatgagg
aacagcagcagcagcggtagttgctgcatgagacgaagtgactgtgataattacaagaac
cccaacagaaacatgcagattcagctcaacactgatggacctataaagtacgtggaggtc
ctgggaggagacatgatgtctcagagtcagtccttcaggtcctgcatgtctccaatgtca
gagtacagtgatttcactttgattaagcccagcagcaccactgactttacggaggtgatc
aatgttctggatgcttccttacccgacagcacgtggacctttgagagccagcaggtgagc
agacggtaa
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