Pseudochaenichthys georgianus (South Georgia icefish): 117453732
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Entry
117453732 CDS
T09629
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
pgeo04020
Calcium signaling pathway
pgeo04510
Focal adhesion
pgeo04540
Gap junction
pgeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117453732 (pdgfrb)
04020 Calcium signaling pathway
117453732 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117453732 (pdgfrb)
04540 Gap junction
117453732 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117453732 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pgeo01001
]
117453732 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pgeo04090
]
117453732 (pdgfrb)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117453732 (pdgfrb)
Protein kinases [BR:
pgeo01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117453732 (pdgfrb)
CD molecules [BR:
pgeo04090
]
Proteins
117453732 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
Adeno_E3_CR1
VEGFR-1-like_Ig-like
RIFIN
Haspin_kinase
Ig_VEGFR-1-like_5th
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
117453732
NCBI-ProteinID:
XP_033948575
LinkDB
All DBs
Position
10:22663949..22695674
Genome browser
AA seq
1101 aa
AA seq
DB search
MRRVTASALHLTVTVTALLYFCTELRCVEISPDDKELTLAEGSFLNLTCSGSGETTWEFK
RDDVPYCQVEQVQNGGPSYQIVQSNITSSVLSLWNMSWKHTGVYLCVDRHTGETKEVAVF
VPDPKVWFIGRSHGMVTKTSEESTIPCVVSNPDINVTLYERDTDQPIRGLYVPSEGYKAP
LEERTYVCRGEMNGEVMESQAFYVYSVTIPEAIDVYINASNTVLKQGEPLTVNCTVHGVE
IADFSWDMPNSEDVEPLTDVLPNMNMRSFLIFPHATVANSGNYVCHVHEPVLDQTASASV
NITVLERGFVDVKAARKQNISARLQENVELRVEIEAYPPPQVRWSKDGATIKGHKPITTR
QEHEIRYVTILTLVRVRTEQKGLYSVLVTNGDDTKEVMFDLEVQVPSQIKDLTDHHLPGK
KHLVTCVAEGVPAPSIQWYSCDSMHKCSNQTEVWQPLIAEPEVVSIRTNVSYSDTRKTSQ
VRSQVTFHKPQQVTVRCETSNRAGLLDRRDVKLVSNTLYSQVAVLAAVLALVVIIIISII
ILVAVWRKKPRYEIRWKVIESVSQEGHEYIYVDPIHLPYDLAWEMPRDNLVLGRTLGSGA
FGRVVEATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGA
CTKQGPLYLVTEYCRYGDLVDYLHRNKHSLLQNYAEKNQDESCLISGGSTPLSQRKGYVS
FGSESDGGYMDMSKDEPSIYMPMQEHMDTIKYADIQPSPYESPYQHDIYQEQGGSRLDLF
ISDSSALTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDI
MHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFSLGGTPYPDLPMNE
LFYSALKRGYRMSKPAHASDEVYEIMKKCWDEKFESRPEFSFLVQSVGNMLTDSYKKKYN
QVNDSFLKSDHPAVTRTKPRLSSPFPIANPAFGSPPPHYVPPDPYTQSPGPGEFREEADT
QEVVTAYNEYIIPIPDPKPDDVFTDVTSESPASSLALEEETDSMSQDTADTLPEEDRPED
TSERDALLGCSGTPEVEDSFL
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggtgacggcatccgcgcttcatctgacggtcacagtgacagctctcctgtat
ttctgcaccgagctgcgctgtgtagagatctcacccgatgacaaagagctcaccttggct
gaaggctcctttctcaacctcacctgctccggctcaggggaaaccacctgggagttcaag
agggacgatgtgccgtactgccaagtggaacaagttcaaaatggtggtcctagctaccaa
attgtgcaaagcaacatcacatccagtgttttgagcttgtggaacatgagctggaagcac
acgggggtgtatctgtgtgttgaccggcacactggagaaactaaggaggtggctgttttt
gtcccagaccctaaggtgtggttcatagggcgctcccacggcatggttacaaagaccagt
gaggagagcaccatcccctgtgtggtgagcaatcctgacatcaacgtcaccctgtatgag
agggacactgatcagcccatcagggggctgtatgtccccagcgaggggtacaaggcaccg
ctggaggaacggacctatgtgtgtcgtggagagatgaacggggaggtgatggagtctcag
gccttctacgtctacagcgttaccatcccagaggccatcgacgtctacatcaatgcgtcg
aacaccgtcctgaagcagggcgaaccgctgactgtaaactgcacagtgcacggagtggag
atagcagatttctcctgggatatgcccaatagtgaggatgtcgagccgctgacagacgtc
ctgcccaacatgaacatgcgctccttcctgatcttccctcacgccacggtggccaacagc
ggaaactacgtgtgccatgtccacgagcctgtcctagaccagacggcctctgccagcgtc
aacatcactgtgctcgagcgaggttttgtggacgtgaaggcggctcggaaacaaaacatt
tcagcccggctgcaggagaacgtggagctgagggtggagattgaagcctaccctccccct
caggtccgctggagcaaagacggggccaccatcaagggacacaaacccatcacaaccaga
caagagcatgagatcaggtatgtcactattctaaccttggtaagggtgaggacggagcag
aagggcctctacagcgtcctggtcacaaacggagatgacacaaaggaagtgatgttcgac
ctggaggtacaagttccctctcagattaaagacctgacggaccaccacctccctggaaag
aaacacttggtgacctgtgtcgctgagggggtcccggccccgagcatccagtggtacagc
tgtgacagcatgcacaagtgtagcaaccagacggaggtgtggcagcctctgatagcagag
ccagaggtggtgagcatccggaccaacgtgagctacagcgacactcgtaaaacaagccag
gtgcggagccaggtgaccttccacaagccccagcaggtgacggtgcgctgcgagaccagc
aaccgggccggactcctcgacagaagagacgtcaaactggtgtccaacacgctgtactcc
caggtggcagtgttggctgctgttctggccttagtggtcatcattatcatatccatcatc
atcctcgttgctgtatggaggaagaaacctcgctatgagatcagatggaaagtgatagag
tctgtgagccaggaagggcacgagtacatctacgtggatcccatccacctgccttatgac
ttggcctgggagatgccacgagacaacctggtgctgggtcgcactcttggatcaggagcc
tttggcagggtggttgaggcaactgcgtacggtctcactcattcccagtccagcacaaag
gttgcggtgaaaatgttaaaatctacagccaggaggagtgagactcaggctctgatgtca
gagttgaagataatgagtcacctgggcccacacctcaacatcgtgaatttgctgggagct
tgcaccaaacaaggccctctgtatctggtgacagagtactgtcgttatggcgacttggtg
gactacctgcacaggaacaagcacagcctgctgcagaactatgcagagaagaaccaggac
gaaagctgcctcatctccggaggaagcactccactcagccagaggaaaggctatgtgtcc
tttgggagtgagagtgacggaggatacatggacatgagtaaagatgagccctccatctac
atgcccatgcaggagcatatggacaccatcaagtatgcagacatccaaccctctccatac
gagtctccctaccagcatgacatctatcaggaacaaggtggcagcagattggacctgttc
atcagtgactcttctgccctcacatatgacgatctgttgggcttcagctaccaagtcgcc
aaggggatggagttcctcgcctccaagaattgcgtccatcgtgacctcgctgccaggaat
gtgttgatttgcgaggggaaactggtgaagatctgcgacttcggcctggccagagacatc
atgcatgattccaactacatctctaaaggcagcaccttcctgcccctgaagtggatggca
ccagaaagtattttccataatttgtataccaccctgagcgacgtgtggtcgtacggcatc
cttctttgggagattttctctttgggaggaaccccctaccctgatctgcccatgaatgag
ttattctacagcgctttgaagagaggctaccgaatgtccaaacctgcacacgcctccgat
gaagtttatgaaatcatgaagaagtgctgggacgagaagtttgaaagtaggcctgagttc
tcctttctggtccaaagtgttgggaatatgctgaccgacagctacaaaaagaaatacaac
caagtcaatgacagcttcttgaagagtgaccatccagcagtcacccgcaccaaacccagg
ctctcctcaccctttccgattgccaacccagctttcgggtccccacccccgcactacgtc
cccccggacccctacacccagagcccgggccccggagaattcagagaagaggcagacaca
caggaagtcgtaactgcatacaacgaatacatcatccccatcccagaccccaagcccgac
gacgttttcactgacgtcacatcagaaagccctgcaagctctctggctctggaggaggag
actgactccatgtcgcaggacacggctgacactctcccagaagaggaccggccggaggac
accagcgagagagacgctctgctgggctgctccgggacgcccgaggtagaagacagcttc
ttgtag
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