Pseudochaenichthys georgianus (South Georgia icefish): 117453889
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Entry
117453889 CDS
T09629
Symbol
ptcd3
Name
(RefSeq) small ribosomal subunit protein mS39
KO
K17659
pentatricopeptide repeat domain-containing protein 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117453889 (ptcd3)
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
117453889 (ptcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_mS39_PPR
PPR_2
PPR_3
PPR_long
PPR
TPR_24
RPM2
CBP_CCPA
Motif
Other DBs
NCBI-GeneID:
117453889
NCBI-ProteinID:
XP_033948817
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All DBs
Position
10:complement(35270669..35298251)
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AA seq
437 aa
AA seq
DB search
MVSPSQKPSVSNNMAAPGRHVGHYIQRNSRVLLNNFEQLWSHRNFGWTSALRQQAAEANK
EPTDTIVIPRKKTWSKEAVLEALSSTVGRDPTAYPYNFQDDPFLSPRTVNEFKLYSLSKE
SGRSAAKFFINNNPKYFTTDFAEPHIPCLMPETVSLLLEDVSEEALKERVRLRKVTAAVE
MYDQLLQSGTAVSMETTYDLLDLICLYCDRDPVEEGGPQSEDMEEPGEEVRQGRGRPRRA
SDFMKFSWKENNNAERIFNLLPERDTRCYSALIRGMVKHGAHAKAFSIYTDLLNNRLTAD
VHIFNALLIAAPDLRDKYNERWDLLAELLNQMSQQKVQPNLSTFNSVLKALRRCGSLAKT
QAIHTLNEMKAMGIAPSLASYDHILNAFSKAASSSGAVNTDILQEVMSELEGRSFTCQDP
DDVLFFSTAMRIVSIFY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggtttctccctcccagaagccttcagttagtaacaacatggcggcgcccggtaggcac
gtagggcattatatccaaagaaacagtcgggttttgcttaataatttcgaacagctatgg
agtcacaggaattttggttggacgtcagctctgcgacaacaagctgcagaagctaataaa
gaacctacagatactatcgtcatccccaggaagaaaacatggagcaaagaggcggtgctg
gaggctctgtcttccactgtgggcagggatcctacagcatatccctacaacttccaggat
gatcctttcctctcgcccaggacagttaatgagtttaagttgtactctctctctaaggag
tctggcagatctgcagccaaattctttatcaacaataatcccaagtatttcaccacagac
ttcgctgaaccacatataccgtgtctgatgccagagacggtgtcactgctcctggaggat
gtgagtgaggaggcgctgaaggaacgagtccgcctgaggaaagttacagctgctgttgaa
atgtacgaccaactcctgcagtctggcacagcggtctctatggaaactacatatgacctg
ttggacctgatctgtctgtactgtgacagagaccctgtggaggagggggggccgcagtca
gaggacatggaggagcctggggaggaggtgaggcagggccgggggaggccgcgccgggcc
tcagacttcatgaagttcagctggaaggagaacaacaacgcagagcggatcttcaacctg
ctgccagagagagacacacgctgctactcggctctgatcagaggcatggtcaagcatgga
gcccacgcaaaggccttcagcatttacacagacctgctcaacaacagactgaccgctgac
gtccacatcttcaacgctctgctgatcgcagctccagacctcagagacaaatacaacgag
agatgggacctcctcgctgagctgctgaatcagatgagtcagcagaaagtccagcccaac
ctctccaccttcaacagcgtcctgaaagctctgcggcgctgcggctctctggccaaaaca
caagccatacacactctgaacgagatgaaggccatggggatagctcccagcctggcttcc
tacgaccacatcctgaacgccttctccaaagcagcctcctcctctggcgcggtcaacaca
gacattctacaggaagtgatgtcagagctggagggaagaagcttcacctgccaggacccc
gatgatgttctattcttctccaccgcaatgagaatagtaagtattttttattaa
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