Pseudochaenichthys georgianus (South Georgia icefish): 117453993
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Entry
117453993 CDS
T09629
Symbol
egf
Name
(RefSeq) LOW QUALITY PROTEIN: pro-epidermal growth factor
KO
K04357
epidermal growth factor
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
pgeo04012
ErbB signaling pathway
pgeo04020
Calcium signaling pathway
pgeo04068
FoxO signaling pathway
pgeo04510
Focal adhesion
pgeo04540
Gap junction
pgeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117453993 (egf)
04012 ErbB signaling pathway
117453993 (egf)
04068 FoxO signaling pathway
117453993 (egf)
04020 Calcium signaling pathway
117453993 (egf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117453993 (egf)
04540 Gap junction
117453993 (egf)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117453993 (egf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pgeo04052
]
117453993 (egf)
Cytokines and neuropeptides [BR:
pgeo04052
]
Cytokines
Growth factors (RTK binding)
117453993 (egf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
cEGF
FXa_inhibition
EGF_3
EGF_CA
EGF
EGF_MSP1_1
DUF5050
Motif
Other DBs
NCBI-GeneID:
117453993
NCBI-ProteinID:
XP_033948933
LinkDB
All DBs
Position
10:9842751..9863092
Genome browser
AA seq
1085 aa
AA seq
DB search
MDLDGKNQRRILAGVGRPILLDFHYREERVYWADRHSGVMYKASAGGAHRQKLSSDKHIS
GLAVDWIWNRVYWTSEEKGKIKAMDINGXNERTLLRHLTKPSNINVDPTNRFLFWLSGGM
TPSIQRSDVTGQTKTTLIKIAEQLEALSIDREEKSLFWVQFGLQGESAIASCDYDGNVLH
IIDQPLRSQSMGISVFLEHLYYTDAATRLVKQVNKYTGGAPLNLKQTAKPPGAIKVVHPL
NQPMTDYQSSFPGCDEQSGNCMNVCSSIAEKGICQCSEGFALNKQGTHCEDVNECARWNH
GCSLGCENIPGSYFCSCPKGYALLPDRKTCGEITPCRGNITCGHGCLSTDEGDVCVCPEG
SSLQEDGQACTGCLSADRGGCSQLCTPVTPARWQCGCLPGYQLHQDGKRCIATGPPLYLL
VANFDNVRQIDPDGSGDQTVVEEPRGAIIALDYDPVQQNVYFASTSKKTIESVNLNSGSR
DILVSDGLDSPEGLAIDWIHRRMYWTDTSQSTIDCSNLVGLNRETIVSKGLEKPRGIAVH
PLAKKLFWTDIGAVPVVESSSLKGKHRVVIASTNLVSPSGLTIDFPEDRLFWCDQSTGLV
ETAALDGSDRQVLVENQVGEACARPFDLAVFEDRLWISDREHQQLRSVHKRTGRKLQRIH
GNMVQPASIVVVHPLAKPGADVCLHLNGGCAQVCKSKLGLAHCSCLPRYILSSDGKSCLP
EDATNGTAESGDSESSDLTSLKNKTFNDEGTPLTPELSADKAQDDLDSEEDNDPTRFTDK
MVSDQHECYSLRCDVNAECLLSAGSPTCLCLEGFTGDGQVCADIDECKQETHKCDKNAEC
QNAMGNYLCKCQAGYYGNGKTCQELETTTPWPMTDSPADVTTGHHNSNSVESCPSSYESY
CLYQGVCVYFPEMEAYACNCAPGYMGERCQFSDLEWWELQQAEEEKRRNVVIAACMVLLV
SLLSIAACATYCYGTRTFFHKQPSVDNVSETSVTDESMSETTSMPRFYMVAENGMMRKII
PAMGCPRRAVCPSCSSETGDNPVSEGSGTLSQHNRGYECSMVSAVAMETTHRHVHHSSQS
PSSSY
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgatgggaagaaccagaggaggattctggctggggtgggaagaccgatcctg
ctcgactttcattatagagaggagagagtttactgggctgacagacacagtggggtcatg
tacaaagcatcagcgggtggagcacacagacagaaactttcatctgacaaacatatctcc
ggcctcgcagttgactggatttggaacagagtatattggacaagtgaagaaaagggaaaa
atcaaggcaatggatataaacgggnaaaatgaaaggactcttttaagacacttgaccaaa
ccaagtaacataaacgttgaccctactaacagatttcttttttggctctctggtgggatg
accccgagtatccagcggagtgatgtgacaggacagacgaaaactacacttataaagata
gcagaacaactggaagcattgtccattgaccgagaggaaaaaagtctgttctgggttcag
tttggtctacaaggagaaagtgccattgcttcttgtgattacgacgggaacgttctgcac
atcatagatcagcctcttaggtctcagtcaatggggatatcagtttttctggagcacttg
tactacactgatgctgctactcggcttgtaaaacaagtaaacaaatacactggcggagca
ccactgaacttaaaacaaactgcaaaacccccaggtgctatcaaggtggtacaccccctc
aaccagccaatgacagactaccaatcctcattcccaggttgtgacgaacagagtggaaat
tgcatgaatgtttgttccagtatagccgagaaggggatctgccagtgcagtgaaggcttt
gctctaaataagcaaggcactcattgtgaagacgtgaatgaatgtgcccgttggaaccac
ggctgctctcttggttgtgaaaacatcccaggctcctatttctgtagctgccctaaagga
tacgctctcctcccggacaggaagacatgtggagagatcaccccatgcagagggaatatc
acgtgtggccatggatgcctgtcaacagacgagggggatgtgtgtgtgtgtccagaggga
tcgtccctgcaggaggatggacaagcctgtactggctgcttgtctgcagacagagggggg
tgcagtcagctctgtactcctgtcactcctgctaggtggcagtgtggatgtctgccggga
taccagctccaccaagacggcaaacgctgcatcgccactggtccaccactatatctacta
gttgctaattttgacaacgtacggcaaattgatcctgatggctctggtgatcaaaccgtt
gtggaagagcccagaggagcaatcatagctttggactatgaccctgtccagcaaaatgtg
tactttgctagtacaagcaagaagacaattgagagtgttaatttgaacagtggatcgaga
gacattctagtctctgatggtttggactctccagaaggactggcgatagactggatccac
cgcaggatgtattggaccgacacaagccagtcaactattgactgcagtaacttggttgga
ctgaacagagaaaccattgtaagcaaagggctggaaaaaccaagaggaattgcagttcat
cctttggcaaagaagttattctggactgacataggggctgtgcctgtcgtggaaagttcc
tctttgaaagggaagcaccgtgttgtcattgctagcactaaccttgtgtcaccaagcggc
ctgaccatcgatttcccggaggatcgtctgttctggtgcgaccagagcacgggcctggtg
gagacggctgctctggacggttcagatcgacaagtcctggtagagaaccaagtaggtgag
gcttgtgcccgaccttttgaccttgccgtatttgaggacaggttgtggatatccgatcgg
gagcaccagcagctgaggagcgtacacaagcgcactgggagaaaactgcaacgtatccat
gggaacatggtccaaccagcatccattgtggtggttcatccccttgctaaaccaggggca
gatgtttgccttcacctgaacggaggttgtgcccaggtgtgtaaaagcaaactgggattg
gcgcactgctcctgtctgccgcgctacatcctatcatctgacgggaaaagctgcctgcct
gaggatgcaactaacggaacagcagaatctggagacagtgagtcctcagatttaacatct
ctcaaaaacaaaaccttcaacgatgagggcacccccttgaccccggagctgtcagcggat
aaagcccaggatgatctagactctgaagaagacaacgatccaactcgctttacagacaag
atggtttccgaccagcatgagtgttactctcttcgctgtgatgttaatgcagagtgcctg
ctgagtgctggcagcccgacctgtctctgtctagaaggttttacaggtgatggacaggtc
tgtgctgatattgatgagtgcaaacaggaaacgcacaaatgtgacaaaaatgcagaatgc
caaaatgccatgggaaattatctctgcaagtgccaggctggatattatggcaacgggaag
acatgtcaagagttggagaccacgacaccatggccgatgaccgatagtccagctgatgtc
accaccgggcaccacaacagtaactcagtagagagttgcccctcctcctatgagtcctac
tgtctgtaccagggtgtctgcgtctacttccctgaaatggaggcctatgcttgcaattgt
gcaccaggctatatgggggagcgttgtcagttcagtgacctggagtggtgggagcttcag
caggccgaggaggagaagaggaggaacgtggtgatcgcggcctgcatggtgctccttgtc
tccctgctctccatcgctgcctgcgccacctactgctacggaactagaacattcttccac
aaacagccctcagtggataatgtgagtgagaccagcgtgacagatgagagcatgtcagag
accaccagcatgcctcgattctacatggtggcagaaaacggcatgatgagaaagatcatc
cctgccatgggctgtcccagaagagccgtctgtccatcctgctcttcagaaacaggtgac
aaccctgtgtctgaagggtcgggaacattgtcccaacacaacagagggtacgagtgttcc
atggtgtctgctgttgccatggagaccacacatcgacatgtccatcactcaagtcaatca
ccgtcaagctcatactga
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