Pseudochaenichthys georgianus (South Georgia icefish): 117454944
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Entry
117454944 CDS
T09629
Name
(RefSeq) H-2 class I histocompatibility antigen, Q10 alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04144
Endocytosis
pgeo04145
Phagosome
pgeo04218
Cellular senescence
pgeo04514
Cell adhesion molecules
pgeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117454944
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117454944
04145 Phagosome
117454944
09143 Cell growth and death
04218 Cellular senescence
117454944
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117454944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117454944
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
117454944
Exosome [BR:
pgeo04147
]
Exosomal proteins
Proteins found in most exosomes
117454944
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
Antigens
117454944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
New_glue
Ig_3
SecG
Ig_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
117454944
NCBI-ProteinID:
XP_033950132
LinkDB
All DBs
Position
11:4207388..4218383
Genome browser
AA seq
433 aa
AA seq
DB search
MYFLAVFVLLGTGLTANCAMHSLTYIYTAFSKPVELPGLHEFTAMGLLDNKMIDYFDSDN
QNKVPKQDFMKEKMPAEYWEKGTQSRQSKQQWFKVNINILMKRMRQNDTDVHILQWMHGC
KGEMQPDGTLQYLHGTDMYSYDGTDFLSFDDNDSTWVAPTAASLQTKRKWDEVKVLKEYT
KGYLETECMDWLSKFVEFGKQIDAIPPKMHVFSKKANSEKNIILSCMATGFYPKDISLQI
KRNGRVLTKEDGVSSTGTRPNGDETYQRTDRVEILRTDVSTYTCEVKHVASGMHVEKEWD
HTLPSGSGSIIGAGVGVLLVLLLLAVLAVLLVLYKKGKLGGSSNSSNSSNSTSDGSGEAL
KTVTIKGSDESVNSAGTKDSGVRDHDVEASEALMKGSDESVNSAGTKDSGVPGGTPSPQS
SPTSSLQGGKYLR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcctcgcagtatttgtccttttgggaacaggactgacggcaaactgcgcgatg
cattccctcacctacatctacacagccttctccaaacctgtggaactcccgggcctccat
gagttcaccgccatggggctgctggacaacaagatgatcgactactttgacagcgataat
cagaacaaagttcccaaacaggactttatgaaggagaagatgccggcagaatactgggag
aaaggcacgcagtcccgccagagcaagcagcagtggttcaaagtcaacatcaacatcctg
atgaaacgaatgagacagaatgacaccgacgtccacattctgcagtggatgcacggctgt
aagggcgaaatgcagcctgacggtacgcttcagtacctccatgggacggacatgtacagc
tacgacgggaccgacttcctgtccttcgacgacaacgactccacctgggtggccccaacc
gccgcgtctctgcagactaagaggaagtgggatgaagtcaaggttctgaaagaatacacc
aaaggctacctggagactgagtgcatggactggttgagcaagtttgtggagtttggaaaa
caaattgatgccattcctccaaagatgcacgtgttttcaaagaaggccaattcagagaag
aacatcatcctgtcgtgcatggccaccggtttctacccgaaagacatctcgctgcagatc
aaacggaacggccgtgttctaaccaaagaggacggagtgtcttcaacaggcactcgacca
aacggagacgagacctaccagagaacagacagagtggagattctgaggactgacgtgtcc
acctacacctgtgaagtgaagcatgttgcgtcaggaatgcatgttgagaaggaatgggat
catacacttcctagcggttcaggatccatcatcggcgcaggggtaggggtgctgctggtg
ctgctgctcctggccgtgttggcggtgctcctggttctctacaaaaaaggaaagctcgga
ggaagcagcaacagcagcaacagcagcaacagcaccagtgatggctcaggcgaggcactt
aagactgttactatcaaaggctcagacgaatctgtcaacagcgctggcactaaggactct
ggcgtccgcgaccatgatgttgaggcatctgaagctcttatgaagggctcagacgaatct
gtcaacagcgctggcactaaggactctggcgtccctggtggcacccccagcccccaatcc
agccccacatccagcctacaaggagggaaatatctcagatga
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