Pseudochaenichthys georgianus (South Georgia icefish): 117456114
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Entry
117456114 CDS
T09629
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X3
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00280
Valine, leucine and isoleucine degradation
pgeo00650
Butanoate metabolism
pgeo00900
Terpenoid backbone biosynthesis
pgeo01100
Metabolic pathways
pgeo03320
PPAR signaling pathway
Module
pgeo_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
117456114 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
117456114 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117456114 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117456114 (hmgcs1)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
117456114 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Lectin_C_term
Motif
Other DBs
NCBI-GeneID:
117456114
NCBI-ProteinID:
XP_033951752
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All DBs
Position
12:253071..264009
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AA seq
560 aa
AA seq
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MSRVLLSRFTTSLTSLKRSSGRPLPLEPVLCSLYKMSFGRQLSGMQRMPGSAPISSLGPW
PKDVGIIALELYLPSQFVDQTELEREDGVAPGKYTVGLGQDRMGFCSDREDINSLCLTAV
QKLMERNGLSYDSVGRLEVGTETIIDKSKSVKTVLMQLFEDSGNTDVEGIDTTNACYGGT
AALFNAVNWVESSSWDGRYAVVVAGDIAVYASGSARPTGGAGAVAMLVGPNAPLAFERGL
RGTHMQHAYDFYKPDLMSEYPVVDGKLSIECYLSALDRCYAVYRNKIHAQWQREGSEERF
SLEDFSYLVFHSPYCKLVQKSLARLMLNDFLLHPNPNTETGPFTGLEAFRDVKPEETYFD
RDVEKAFLKASSEMFEKKTKHSLLVSNQNGNMYTPSVYGCLASLIATHSSAQIAGQRVGV
FSYGSGFAATLYSIRVTQDHTPGSALDKLVSSLSDLKLRLDSRQKVSPAAFSDCMKLRQD
THHLAPYVPSSSVEDLFPGTWYLTRVDEKHRREYARSAPSIELSAEPEGVRSTCATEQHI
PSPAKKMPRIPATPEAPVSN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgggtcttgttgtcacgcttcacgacatccttgacatccttgaagcgcagcagt
ggtcgtcctctgcctctggaaccagtgctctgctcgttgtataagatgtcctttggcagg
cagctatctggcatgcaaaggatgccaggatcagccccgatcagtagcctgggaccatgg
cccaaagatgtgggcatcattgccttggagctgtacttgccgtcgcagttcgtggaccag
acggagctggagcgggaggacggcgtggctcccggtaaatacaccgtggggctcggccag
gaccgcatgggcttctgctcggaccgcgaggacatcaactcgctgtgcctcaccgcggtc
cagaagctcatggaaaggaacggcctctcctacgacagcgtgggtcgcctggaggtcggc
accgagaccatcatcgacaagtccaagtcggtgaagacggtcctcatgcagctgtttgag
gactctggtaatacagatgtggagggcatcgacaccaccaacgcctgctacgggggcacg
gcggctctcttcaatgcggtcaactgggtggagtccagctcctgggatggccggtacgct
gtggttgtcgcgggggacattgctgtttacgcctcaggaagtgcgcggcccaccggaggg
gccggcgccgtggccatgctggtggggcccaacgctcctctggcctttgaacgaggtctg
agaggaacccacatgcagcacgcctacgacttctacaagcccgacctgatgtcggagtat
cccgtggtggacggaaagctgtccatcgagtgctacctgagcgccttggaccgctgctac
gctgtgtaccgcaacaagatccacgcgcagtggcagagagagggctcagaggagcgcttc
agcctggaggacttcagctacctggtcttccactctccgtactgcaagctggtgcagaag
tctctggccaggctgatgctcaacgacttcctgctccaccccaaccccaacactgagacg
ggacccttcaccggcctcgaagccttcagagacgtgaagccagaggagacgtacttcgac
cgcgacgtggagaaggctttcttgaaggccagctcagagatgtttgagaagaagaccaag
cactccctgctcgtctccaaccagaacggaaacatgtacacgccctcggtctacggctgc
ctggcatcgctcatcgcaacacacagctccgctcagatagccggacagagagtcggagtt
ttctcgtacggctcgggcttcgctgccacgctgtattccatcagagtcacgcaggaccac
acgccaggatctgctctggacaaactggtgtccagcctgagcgacctgaagctgcgcctg
gactccaggcagaaggtgtctcctgccgccttctccgactgcatgaagctgagacaggac
acgcatcacttagccccctacgtccccagcagctcggtggaggatctgttccccgggacg
tggtacctgacccgagtggatgagaagcaccgcagggagtacgcccgcagcgcccccagc
atcgagctgtctgcagagccagagggggtccgctccacctgcgccacagagcagcacatc
cccagtcccgccaagaagatgcctcgtatcccagcaacccccgaggctcccgtcagcaac
tga
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