Pseudochaenichthys georgianus (South Georgia icefish): 117456137
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Entry
117456137 CDS
T09629
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
pgeo04137
Mitophagy - animal
pgeo04141
Protein processing in endoplasmic reticulum
pgeo04210
Apoptosis
pgeo04217
Necroptosis
pgeo04621
NOD-like receptor signaling pathway
pgeo04622
RIG-I-like receptor signaling pathway
pgeo04920
Adipocytokine signaling pathway
pgeo05132
Salmonella infection
pgeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117456137 (traf2b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117456137 (traf2b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117456137 (traf2b)
09143 Cell growth and death
04210 Apoptosis
117456137 (traf2b)
04217 Necroptosis
117456137 (traf2b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117456137 (traf2b)
04622 RIG-I-like receptor signaling pathway
117456137 (traf2b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
117456137 (traf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117456137 (traf2b)
09171 Infectious disease: bacterial
05132 Salmonella infection
117456137 (traf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117456137 (traf2b)
04121 Ubiquitin system [BR:
pgeo04121
]
117456137 (traf2b)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117456137 (traf2b)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117456137 (traf2b)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
117456137 (traf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-RING_6
zf-C3HC4_2
Paramyxo_NS_C
zf-RING_2
Mcp40H-20_sensor
Motif
Other DBs
NCBI-GeneID:
117456137
NCBI-ProteinID:
XP_033951786
EnsemblRapid:
ENSPGEG00000004389
LinkDB
All DBs
Position
12:complement(16223197..16240956)
Genome browser
AA seq
520 aa
AA seq
DB search
MAYISMDCPSSLPGIPQSVLSVPMENKYKCQQCHQVLRKPVQAQCGHRFCVHCFKQLTSS
GPKPCEACREEEIYEEPFSILNSNEAFPDNAAGREIASLPARCLNEGCVWTGSIKEYEAQ
HEGRCELEQVKCEACQNTILLSEKDKHNERECEERTLNCKYCKTSFNFKEIKAHDEICPK
FPLQCKDCGKKKIPREKFSDHSKSCAKSKSACPFSDVGCKHVIENGKQSDHEHSSTMEHL
RLLLPMVLSIAVPPSDASGPGEWQEDSGLGLYRAPEEGVSMGSGAAASSQSMDLDKKVKA
LENIVCVLNREVERSAVTLEAFAHQHRLDQDKIENLSSKVRQLERTIDMRDLKLSETEQL
VRELQFCTFDGIFVWKISDFSRRRQDAVASRTPAMFSPAFYSSKYGYKMCLRLYLNGDGT
GRGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPIS
EMNIASGCPLFCPLARLAGKSPYLRDDTIFIKAIVDLTGL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcctacatctcgatggactgccccagctctttaccagggattcctcaaagtgtgctg
tcagtgcccatggagaataagtacaaatgtcagcagtgtcaccaggtcctgaggaagcct
gtccaggcccagtgcggacatcgcttctgtgtacactgcttcaagcagctcaccagttct
ggcccaaagccttgtgaagcctgccgcgaagaggagatatacgaggaacctttttcgatt
ctaaatagtaatgaggcatttccagacaatgcagcaggacgagaaatagcaagcctgcct
gccaggtgtctgaacgaaggctgtgtttggacaggctccataaaagagtatgaggctcag
catgaaggtcgttgtgaacttgagcaggtaaagtgcgaggcctgccaaaacacgatcctt
ctttcggagaaggacaaacacaatgagagagaatgtgaagaaagaacgctaaactgcaaa
tactgcaaaacatccttcaactttaaagagatcaaggcccatgatgagatctgtccaaag
tttcccttacaatgcaaagactgtggcaagaagaagatcccaagagaaaagttcagcgac
cacagcaaatcctgtgccaagtcaaagagtgcctgtcccttcagtgatgtgggctgtaaa
catgtgatagagaacgggaagcagagcgaccatgagcacagcagcaccatggagcacttg
cgtctgctgctgcccatggtgctatccatcgccgtgccgcccagcgatgcttccggtccc
ggagagtggcaggaggactcaggtctgggcctgtacagggcccctgaggagggggtcagt
atgggctctggagctgcagcctccagtcagtctatggacctagataaaaaggtaaaagct
ttggaaaacattgtgtgtgtcctgaaccgagaggtagagcgcagtgcagttactttagag
gctttcgcacatcaacatcgtttagaccaggacaaaatagaaaatctctccagtaaagtg
cgtcagctggaacggacaatcgacatgagggacttgaaactgtcggaaactgagcaactg
gtgcgggaacttcagttctgcaccttcgacgggatctttgtgtggaaaatctccgacttc
tcacgccgcagacaggacgccgtggccagtcgaacacccgccatgttctctccagcattt
tattccagcaaatacggctacaaaatgtgtctgaggctgtatttgaatggcgacgggact
ggtcgagggactcacctttcgctgttctttgtcgtcatgaggggaaagtgcgacgctctc
ctcaaatggcccttcagtcagaaggtgacgctgatgctcttggatcagaacaacagggag
cacatcatcgacgccttccggcccgacgtcacctccacctccttccagcggcccatcagc
gagatgaacatcgccagcggctgcccgctcttctgcccgctcgccaggctggccggcaag
agcccctatctgagggacgataccatcttcatcaaggccatcgtggacctcacaggcttg
tag
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integrated database retrieval system
