KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117457271
Entry
117457271         CDS       T09629                                 
Name
(RefSeq) caspase a-like isoform X1
  KO
K01370  caspase 1 [EC:3.4.22.36]
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04148  Efferocytosis
pgeo04217  Necroptosis
pgeo04621  NOD-like receptor signaling pathway
pgeo04623  Cytosolic DNA-sensing pathway
pgeo04625  C-type lectin receptor signaling pathway
pgeo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    117457271
  09143 Cell growth and death
   04217 Necroptosis
    117457271
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    117457271
   04623 Cytosolic DNA-sensing pathway
    117457271
   04625 C-type lectin receptor signaling pathway
    117457271
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117457271
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pgeo01002]
    117457271
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pgeo04131]
    117457271
Enzymes [BR:pgeo01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.36  caspase-1
     117457271
Peptidases and inhibitors [BR:pgeo01002]
 Cysteine peptidases
  Family C14: caspase family
   117457271
Membrane trafficking [BR:pgeo04131]
 Autophagy
  Other autophagy associated proteins
   TRIM-directed selective autophagy
    117457271
SSDB
Motif
Pfam: Peptidase_C14 CARD UPF0180
Other DBs
NCBI-GeneID: 117457271
NCBI-ProteinID: XP_033953132
LinkDB
Position
13:24055521..24060020
AA seq 386 aa
MADELNRIRVKFVDSVNKELIKELLDGLLEVGVLNDGQKDSILEENPSTKDKARALIDTV
RRKGDVASRKMIALLQSRDQTLYDSLGLSSGKPAQPAAAAAPEIKLEQECSDTLIPSTKA
FWTGKQGQRDTYPAAENSIRHRLALLITNITFTDTSLNRKGADRDEENMDTLLVALGYEV
VKLTDLTGKEIDAAVIEFSKHKKLKETDSVVVVIMSHGKLGAVLGVGWKKDKPDEFCINN
IYHHLGPERCPALLDKPKIILIQACRGEKRGSVLVKDGLSCDDASHNTGHEEFEEDGVRY
VIKEKDFLALLSCTPDTVSYRQTDRGSLLIQYFVEVLNTSAHMDDIEELFRKVMQRFEDF
SVNNKRQMPTKDRVTLTRRFYFFPGI
NT seq 1161 nt   +upstreamnt  +downstreamnt
atggcagatgagctgaacaggattagggttaagtttgtggacagcgtgaacaaagaactg
atcaaggagctcctggacggccttttagaggttggtgtcttgaatgatggccagaaggac
tcaattcttgaggagaatcctagcacgaaagataaggcacgtgctctcattgacacagtt
aggagaaaaggagatgtagccagcaggaagatgatcgctctccttcaaagcagagatcaa
acactttatgattcactcggtctttcctctgggaaacctgctcagccagctgcagctgca
gctccagaaataaagctggagcaggaatgttcagacactctgattccttccaccaaggcc
ttctggacagggaaacagggtcaaagagatacttaccctgcggccgaaaattccattagg
catcgtttggccctgttaatcaccaacataacgtttactgataccagtttaaacagaaag
ggagctgatagggacgaggagaacatggacacactgctcgttgctttgggatacgaagtg
gtgaaactcactgacctcacgggaaaggaaattgatgctgctgtgattgagttctccaaa
cataagaaattgaaagagacagacagcgtggtggtggtaatcatgtctcatgggaaactg
ggagctgtcctcggtgttgggtggaaaaaagacaaacctgatgagttttgcatcaacaac
atttaccatcacttgggtccggagagatgtcccgcgctgctggacaaacccaagatcatc
ctcatccaggcctgcagaggagaaaagagaggttcagtgctggttaaagacggtttgtcc
tgtgacgatgcctcacataatactggccatgaagaatttgaggaggatggtgtgcgatat
gtaatcaaagaaaaagatttccttgctcttctgtcctgcactcccgatactgtctcatac
agacaaacagatcgtgggtctcttctcatccagtattttgtggaggtattgaacacctct
gcacacatggatgacatcgaagaacttttcagaaaagtcatgcaacgtttcgaggacttt
tccgtgaacaacaaaagacagatgccgaccaaagacagagtcactctgacaaggcgcttc
tacttctttccaggcatctga

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