Pseudochaenichthys georgianus (South Georgia icefish): 117457490
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Entry
117457490 CDS
T09629
Symbol
mmp13b
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117457490 (mmp13b)
Peptidases and inhibitors [BR:
pgeo01002
]
Metallo peptidases
Family M10
117457490 (mmp13b)
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Peptidase_M66
Reprolysin_5
DUF3833
Reprolysin_4
Reprolysin_3
Metallopep
Motif
Other DBs
NCBI-GeneID:
117457490
NCBI-ProteinID:
XP_033953517
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All DBs
Position
13:complement(34655101..34662935)
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AA seq
459 aa
AA seq
DB search
MIALLLLALVAHSFALPLPSEDNDNLLLAENYLRRFYGLPAGLQGRQKSSGTFQNKIKEM
QRFFQLEVTGNLDDNTLELMNQPRCGVPDIGEYNHFPRNLKWPTNNVTFRIVNYTPDLPK
ADVDRAIRNALNVWSDVIPLTFKKLRKGIADIMISFGSLEHGDYNPFDGPNGLLAHAYPP
GQGMGGDTHFDEDENWTKDSSAYNLFIVASHELGHALGMSHSTDPGALMYPNYSYSEGFP
LSEDDIEGIQALYGPNPNQRKVKPKPDAPNKCDPMLSFDAVTELRGETIIFKDRFYWRLH
PQMPEPEQTLIKSTWPSIPNKVDAAYENPEKDIVIIFSGIRMWALHGYNLRDGYPKYIHK
LGLPKDIRKIDAAVHIKDTGKTLLFTDEHYWSYDEAAGTMDSGYPRSIEQDFPGMSDEVD
AAAFQYGYLYFYHGDLQYEYSYTHRKVTRIMRTNSFLNC
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatagctctgctgctgctggcgctggtcgcacactcctttgctctgcctctgccgtct
gaggacaatgacaacttgcttttagcagagaactacctccgtcgattctatggccttcca
gctggtcttcagggtagacagaagtcttcaggtacctttcagaacaagatcaaggagatg
cagagattcttccaacttgaggtgacagggaatctggacgacaacactttggagctgatg
aatcagcccagatgtggcgtacccgacattggggagtacaaccacttccctcgaaacctc
aaatggccaactaacaatgtcacattcaggatagtgaattacacaccagatctgcccaag
gctgatgtagacagagccatccgcaatgcgctgaacgtttggtctgatgtcatcccgctg
accttcaagaagctgcgcaagggcatcgctgacattatgatcagttttgggtcattagag
catggagactataatcctttcgatgggcccaatggattgcttgctcatgcatacccaccg
ggccaaggcatgggcggagacactcactttgatgaggatgaaaattggaccaaagattca
tcagcatacaacctgttcatagtggcatcccatgagttgggacacgccctcgggatgtcc
cactccacagatccaggcgccctgatgtaccccaactactcctactctgaaggcttccca
ctgtcggaggacgacattgaaggcattcaagctctctacggcccaaacccaaaccaaagg
aaagtgaagccaaagcctgacgctccaaacaaatgtgaccccatgttaagctttgatgct
gtaacggagctcaggggagaaaccataatcttcaaagacagattctactggcgtctccac
cctcagatgccggagcctgagcagacactgatcaagtccacatggccgtccatccccaac
aaggtggacgcagcatacgagaacccagagaaggatatagttatcatatttagtgggatc
cgaatgtgggctttgcatggatataaccttagggatggttacccaaagtacatacacaag
cttggtcttcccaaggacataaggaaaatagacgcggctgttcacatcaaagacactggg
aaaacgttgctcttcactgacgagcattattggagctatgatgaagcagcaggcaccatg
gacagcggctacccacgatccattgagcaagatttccctgggatgtctgacgaggtcgac
gcagctgcttttcaatatggatacctgtatttctaccatggagacctgcagtacgagtac
agctacacccacaggaaggtcacacgcatcatgaggaccaactcttttctcaactgttaa
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