Pseudochaenichthys georgianus (South Georgia icefish): 117457776
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Entry
117457776 CDS
T09629
Name
(RefSeq) homeobox protein otx5-A-like
KO
K09337
cone-rod homeobox protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117457776
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117457776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
DUF5930
SatD
Motif
Other DBs
NCBI-GeneID:
117457776
NCBI-ProteinID:
XP_033953893
LinkDB
All DBs
Position
13:40069521..40072366
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AA seq
295 aa
AA seq
DB search
MMSYIKQPHYSVNGLTLSGPGMDLLHSAVGYPNTPRKQRRERTTFTRAQLDILEALFSKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSTGQSKPRPPKKKASPARDNH
SEASVNAPNGSYSPQPPPPGTSITPSSSAASATVSIWSPASISPLPDPLSVSGTPCMQRT
ATYPMAYSQAPAYSQSYAGSSSYFTGLDCSSYLSPMHPQLSGTGGALSPITASSMGGPLS
QSPASLSSQGYTAASLGFGAVDCLDYKDQAAWKLNFNATDCLDYKDQNSWKFQVL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacattaagcaaccccattactccgtgaacgggttaacgctgtccggcccg
ggcatggatctgctccactccgccgttggataccccaacacaccgcgcaaacagcgtcga
gagcgcaccaccttcacgcgcgcacagctggacatcctcgaggctctgttctccaaaacg
cgctacccggacatcttcatgcgcgaggaggtggccctcaagatcaacctgccggagtcc
cgagtccaggtttggttcaagaaccgccgtgcaaagtgccgccagcagcagcagcagagc
accggtcagtccaaaccgcggccccctaagaagaaggcgtctccggcccgcgacaaccac
tctgaggccagcgtcaacgcccccaacgggtcctacagcccccagccgcctccacccggc
acctccatcacgcccagctccagcgctgccagtgccacggtgtccatctggagcccggcg
tccatctccccgctgccggaccccctgtctgtgtccgggaccccctgcatgcagcgcacc
gccacctaccccatggcctacagccaggcgccggcctacagccagagctacgcgggctcc
tcctcctacttcacgggcctggactgcagctcctacctgtccccgatgcacccccagctg
tcgggcaccggaggagccctgagccccatcacggcctcctccatggggggtcctctcagc
cagtctccagcctcactctcctcccaaggatacacggccgcatcactgggcttcggagcc
gtcgactgtctagactacaaggaccaagctgcctggaagctcaatttcaatgccactgac
tgtctggactacaaagaccagaactcctggaagttccaggtcttgtaa
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