Pseudochaenichthys georgianus (South Georgia icefish): 117458261
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Entry
117458261 CDS
T09629
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1-like
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04530
Tight junction
pgeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117458261
09142 Cell motility
04810 Regulation of actin cytoskeleton
117458261
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117458261
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
117458261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_6
PDZ_2
RNA_pol_Rpc82
Motif
Other DBs
NCBI-GeneID:
117458261
NCBI-ProteinID:
XP_033954509
LinkDB
All DBs
Position
14:complement(21110644..21175013)
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AA seq
1675 aa
AA seq
DB search
MGNVESQNGDSGFYGNASGHISRKQTSRSLRLPNKQPITRRSRLSSSVKQEHRNSDASTR
SSSTPSIPQSLAENGLEPFNATDALEEFGINPHWTQRVAMTMRPESYQHDDDNLATPTPE
TSEADTVAQDGGEGSTGEGEVLGEETYLQRMTEGPREGGSFKKKRSKSADMWREDSLEFS
MSDLSQEHLTSTEEIIDGGEEEEEEEEQFACPRGNAGAAERASSLDHLCSQQSPGLRGQR
SRYTKSRREAQCDGDEEGEGLMSPAEEDGGGYGAFTLPCRRSHCLSEGLAGLGMPSAPCP
AFQGRRAQTTQDISGVLGEGSEYGDSGIDGVTTEIDGYGELVSRRCKAMSASFSVYSATE
SSVFNGSDSGSSSAGGGEGRGGEGGRGGVYENYRKELDNQAWTHQARDCTEEGGSAVSDE
RSSGTLSSAYPSDALIGCAQGTVRKAGALAVKNFLVHKKNKKVEPATRRKWKHYWVSLKG
CTLFLYESDCRSGIDHNSVPKHALWVENSIVQAVPEHPKKDFVFCLSNSVGDAFLFQTSG
QTELENWITAIHSACAAALARQHHREDTVRLLRTEIRKLEQKIDMDEKMKKMGDMQLSTV
TDAKKRKTILEQIFLWEQNLERFHMDLFRCRCYLASLQGGEPPNPKRLLGFASRPTKLSM
GRLGIFSVSSFHALVAARTECSIRRRNQAMPRTISKRRSRFSSLWGLDTTSKRKTKGHPS
INQVFVDGVEPVRKPLERMFEDSASEKSKEKDGSVKSVPQQNVESDIWVPDYLQPSWVSL
PDNKPVLAIVQPGETALDVLSSVCKTHTIDPSGHYLRLKMCIDNKVLFYIPTLEEDISDL
LYKEIEVCPKATKVIRFDKAESCTIGYGFSVAVLDEEGTQQLHITEVKADGLASAKGLKA
GDEILLLNGKPASALQMDDMRSAFANQALTLSVSTLPQMDPRVLCPLPPGALMQSRRTRL
QTSSLQSQEDILDEVSGLTVESPDQSMEEGSRLTPQSPGDYQEDKTCLGTGQKSTEQVTA
FCRSLHDMNPLECPMSSSSSSSSSSLSPSPVTALPPAATQRQLSHADKLRKVINELVETE
KAYVKDLNCLIECYLTPLQKESFLTQDELDVLFGNLGEMVEFQVEFLRTLEDGIRLVPDL
DRLERVEHFKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLAKAKTDPDFKAFLAER
NPRQQHSSTLESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHYHLDVAMKAMNKVASHIN
EMQKLHEEYGAVFDQLINEQTAHRKEVADLSMGDLLLHSTVVWINPPSSLTKSKKDPDLA
AFVFKTAVVFVYKDSSKHRRRIGGSHRASVSDDKDPFRFRHMIATDSLQHRALSNSEGTA
VCEIVHIRSESEGRPERTFQLCCSSPDSKKDFLKAVHSILREKQRRQLLKTESLPFNQQY
VPFGGKRLCALKGARSGTNRAESAPSRTLPRRKLVRNRVTIDTDLIFHGNNNNSTDPETT
HHSSYPLMSQHALPQTQKAQGEDTDRWVEEQFDLGCYEVQGMVKETDILSDDDEYCKSVR
AASAEPADLEGKMERLVLQGGEMTSHNLNRRVETGSEVMLSVMQEEEVERIKLCDNSGSV
DSFSSCGVSISRCSTPGLTLAPLKQCSVEGASNKDHDVIWVRRDDFGNGCNGDVF
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgtcgaaagtcagaatggggacagtggtttctacggcaacgcgtcgggacac
atctcccgcaaacagacgtccaggtcactccggctccccaacaagcagccaatcacgcgt
cgttcccggctctcttcttcagtgaaacaggaacacagaaactctgatgcctcaactcgc
tcctccagcacccccagcatcccacaatccttagcagagaacggactggagcctttcaac
gcaaccgatgcactcgaagagttcggcatcaaccctcactggacacagcgcgtcgctatg
acgatgaggccggagtcctatcaacacgatgacgacaacttggccacgccgactcctgag
acctcggaggcggacaccgtcgctcaggacggaggagagggctccacgggggagggggag
gtacttggggaggaaacgtacctccagcgaatgactgagggtccccgggagggagggagt
ttcaagaagaagaggtccaagtcggcggacatgtggagagaagacagcctggagttctct
atgtcagacctgagccaggagcatctgaccagcactgaggagatcatagatggaggagag
gaagaggaggaggaggaggagcagtttgcatgtccaagaggcaatgcaggcgcagctgaa
agggcatcgtctctggaccatctgtgcagccagcagagtcccggcctcagggggcagagg
agccgctacacgaagagccgtcgggaggcccagtgtgatggagatgaagaaggggagggc
ttgatgtctccagctgaagaagatggtggcgggtacggagcattcacgctcccctgccga
cgctcccactgcctctcagagggcctggcagggctcggcatgccgtctgcaccgtgcccg
gctttccagggtcggcgtgcacaaactactcaggacatctcgggtgttttgggtgaggga
agtgagtatggggacagtggcatcgacggcgtcaccacggagatagacgggtatggagag
ttggtgtcacggcgctgtaaggccatgtcggcatcgttctccgtgtactctgctaccgaa
agcagcgttttcaacggcagcgacagcggcagcagcagcgcaggaggaggagagggacga
ggcggcgagggagggaggggaggagtttatgagaattaccgaaaggagctggacaatcaa
gcctggacacatcaggcgagggactgcacggaggagggcggctccgctgttagcgatgag
cgcagcagcggcacactcagcagtgcatatccatcggacgctctgattggctgtgcacaa
ggcacagtcagaaaagcaggggctctggccgtgaagaacttcttggttcataagaaaaac
aagaaggtggaacctgcaacgaggcgcaagtggaaacactactgggtttctctgaaaggc
tgcacacttttcctgtacgagtcagactgtcgctctgggatcgaccacaacagcgttccc
aaacatgcgctgtgggtggagaacagcatcgtccaggccgtgcccgaacatcccaaaaaa
gactttgttttctgcctcagcaactcagtgggagacgccttcctcttccagacgtcgggc
cagacggagctggagaactggatcacggcgatccactctgcgtgcgccgcggctctggcc
cggcagcaccacagagaggacacagtgagactgctgcgaacagagatccgcaagttagag
cagaagatcgacatggacgagaagatgaagaagatgggagacatgcagctgtcgaccgtt
accgacgccaagaagaggaagaccatattggagcagatcttcctgtgggagcagaacctg
gagcggtttcacatggatctgtttcgctgtcggtgctacctggccagcctgcaggggggc
gaaccccccaaccccaaacgcctgctgggcttcgcctcgcgtcccaccaagctgtccatg
ggacgcctgggcatcttctccgtctcctccttccatgcactggtggcagcgcggacagag
tgcagcatcaggaggaggaaccaggccatgcctcggaccatcagtaaacgccgcagccgg
ttctcctctctctggggtctggacaccacctccaagaggaagaccaagggacatccttcc
atcaaccaggtctttgttgatggggtggagccggtgaggaaacctttggagcgcatgttt
gaagactcagccagcgagaaatctaaggagaaagacggctcggtgaaaagcgttcctcag
caaaacgtagagagcgacatttgggttcctgattacctgcagccctcctgggtgtctctc
cccgacaacaagcctgtcctggccatcgttcagccgggggagacagcgctggacgtcctc
agctccgtctgcaagacccatacaatagacccctctggacactacctgcgcttgaagatg
tgtattgacaacaaagtactcttttatattcccacactcgaagaggacatctctgatctg
ctctacaaagagattgaggtttgccccaaagccaccaaggtgatccggttcgacaaagcc
gagtcctgcacaattggatatggtttttccgtggcagtcctcgacgaggaagggacgcag
cagctccatattactgaagtgaaagcagacggactagcctcagccaaaggtctgaaagca
ggggatgagattctcttgctgaacggtaagccagcatccgcgctccaaatggacgatatg
aggtctgcctttgcaaaccaagcgctgaccttgagtgtcagcaccctgccccagatggac
cctcgggtgctgtgccccctcccccccggcgctctgatgcagagcagaagaacccggcta
cagacatcttctctccagagccaagaggacatcctggatgaagtgtccgggctgacagtg
gagagcccagatcaaagtatggaggaaggatcacgactgaccccgcagagtcctggagat
tatcaggaagacaaaacctgcttggggacaggacagaagagcacagagcaggtcactgct
ttctgccgcagtctccatgacatgaatccactggagtgccctatgtcgtcgtcctcgtcg
tcgtcttcgtcgtccctgtccccgagccccgtgacagctttaccccccgctgccacccag
agacagctctcccacgcagacaaactccgcaaggtcatcaatgaactggtggagacggag
aaagcctatgtcaaagacctgaactgtcttatagagtgctacttgacacctttgcagaaa
gagagcttccttacccaggatgagctggacgttttgttcggtaacctcggggagatggtg
gagttccaggtggagtttctccggacgctggaagatgggatccgactggtgccagacctg
gacagactggaaagagtggagcattttaagaaagtgctcttctccttggggggttccttc
ctgtattacgccgatcgcttcaagatctacagcgccttctgtgccagccacacaaaggtc
ccaaaggtgctggctaaagcaaagacggatccagatttcaaagctttcctggctgagaga
aacccccgacagcaacactcgtccactctggagtcttacctgatcaaacccatccagagg
gtcctgaagtacccgctgctgctcagagagctctactctctcacggaccccgacagcgag
gagcactaccacctggacgttgcaatgaaggccatgaacaaagttgccagtcacatcaat
gagatgcaaaagcttcacgaggagtacggagctgttttcgatcagctgatcaacgaacag
actgcgcatagaaaagaggtggcggacctctccatgggggaccttttgcttcattctacg
gtggtgtggatcaaccctccatcctccttgaccaagagcaaaaaggaccccgatttggct
gcttttgtgttcaaaacagcggttgtatttgtgtacaaagacagctccaagcacaggaga
agaattggtggatctcaccgagcgtctgtgagtgacgacaaagaccctttccggttccgt
cacatgatcgcaacggactctcttcaacaccgtgctctttcaaactctgagggaacagcg
gtgtgtgagatagttcacataagatctgaatctgaggggaggccagagagaaccttccag
ttgtgctgcagttctccagatagtaagaaggacttcctgaaagcagtccactccatcctc
agggagaagcagcgccggcagctcttgaagacggagtctctgcctttcaaccagcagtac
gtcccgtttggagggaagcgcctgtgtgcccttaaaggggcgcgttccggcacgaacaga
gcagaatcagctccatcacggacgctgccccgcaggaagctggtgaggaaccgcgtcacc
atcgacaccgacctgatcttccatggcaataacaacaacagcactgatccagagaccacc
caccactcctcctatccattgatgtcccagcatgctcttcctcaaacccaaaaagctcaa
ggggaggacactgaccgctgggtggaggagcagttcgacctgggttgctatgaggtccag
ggtatggtgaaggagacggacattttgagcgacgacgacgaatactgcaagtctgtccga
gcagcgtctgcagaaccggccgacctggagggtaagatggagagactggtgctacagggc
ggagagatgacgagccacaacctgaacagacgggtggagacaggaagtgaggtcatgctg
agcgtgatgcaggaggaggaagtagaacggataaagctgtgtgacaattcaggctccgtg
gactctttctcgtcctgcggggtctccatctcccgctgttcaaccccaggtctgacgctc
gcccccctgaagcagtgttctgtggagggggcctcgaacaaagaccatgatgtcatctgg
gtgcgacgggacgactttggtaacgggtgcaacggtgacgtcttctga
DBGET
integrated database retrieval system
