Pseudochaenichthys georgianus (South Georgia icefish): 117458380
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Entry
117458380 CDS
T09629
Symbol
ttc3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117458380 (ttc3)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117458380 (ttc3)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117458380 (ttc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
zf-RING_2
zf-rbx1
TPR_2
TPR_1
zf-C3HC4
zf-C3HC4_2
TPR_17
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
TPR_11
TPR_16
zf_RING_Vps8_fungal
TPR_14
TPR_8
TPR_6
zf-RING_Vps41
zf-RING_11
EST1_DNA_bind
Motif
Other DBs
NCBI-GeneID:
117458380
NCBI-ProteinID:
XP_033954700
LinkDB
All DBs
Position
14:23702024..23751842
Genome browser
AA seq
1734 aa
AA seq
DB search
MSDSDSEIGEEWEAIHNRTPVKLLTRNDTVVALRPQEIVFDKWSQIPLETRRQAGERMRI
CAFWLPLLLQRDEPSNPSCWAYQIDLISSDTDDLDMKHLQKIETLEAILRALEKGTVKRD
QTKHVIWISNMFNLRTPEALKDAMCWLERTGEPGIRHRVMSLGHPQICFTALHVIFTEFA
KYIQKMGSDSEKTMKELNVRPAEYLIEKSEEMKKKGNENFKNMQFEEAVKYYSKAIKLYP
DNHFIYGNRALCYIRCKKYLKAVTDGKRATLIKPLWVKGHFRFCEALFFLGEGKKAIEAN
VLARGLCKDNRDGIKDLEDQHEKFLLEMPEPKVVPSKKNQSKKAQTLEPRPLSVNSVHKN
DPPPKSKTPVVKPEKQQVKNEKTVPSEGSTKNSKPSKSEPPTKNGKGDSGTPTKKKPKNR
SPPEVKKQNEGDSKTGACKELKVMVQDAHSALTDLRCRNAEQAFRKALNILDTSTAKEVG
LSTLDVLLLLYGHAAALTEIGQPEELGEAQKLLVKIKSFEERTFQCLVYYATGRVFLKEN
RFAVALEQFSDSLQTVKNKITPGKLTWPLTNEIVKETQPDYFKAMLEQAIELCTFPPPPD
AICRLEICLCPMKAEIYLTDPDFKGYIRISCCQSCIIEYHIACWKALKTSSFSDRNEKDF
LQELCFTSDCLGKICSIVIFGTTGLPKCTFKAAITKPSTPKKLKVNQKCTSLRKMKAKDE
HKLKRRQHKQSFIEKQTINEEILLQKEDSTTQIEQKAWLLYRDRVLLQISQNLELLREEP
GLQASALTQSLKPWLELDSSRGNQIAERILNWKPMETLGLVVELLLERKNRVWARILIQL
LSSCRDINPKLHNWASHLNDAGLNAAKSFIDRHAGHLETLDLAFLLGFGPMQDSIIEEFD
IGPDLFSTIGLTETEYLKQAPHDNMRLFIWTLEEHRDQFLSCHAILDEYFDMMDGHCSVL
KKSDENQNNSPLKSRARKKKKGANGVIVWSGNSSQTQREEWDQDFFEDDTLSFLHPSDPF
SVPSHLREQVATFEDQYNTTRHRGHYKNILDNNPDPTKESLYDYFAQILEEHGPLVAEDP
LLVGELDNFPVVAKDKIQEVGGFEVFLLESLRFIKMGRCIGLAKHAVTLQQAGHGASLDD
LDDITDPDIEYPCPGLDEGSFSAFPSDKNGYSHAQNVYPILPNPYAFAPLPHAPAFVGVN
NSFYAWSNGDDEKQDPYFIPDDDGALDLFRSAGDRGVSETSSVSSDESVLKKHAAVQTCN
ETVRSVAVNTEIHEPFESCPGDINKKQHSGRMLEQSMKEMSKDCDKVNLTHKEDLAVLEE
EVQQITTNIQVTIQELGMFQQKLEEEVKKDQKEKRANQEGLKALKVETEDLVTQHRSFTQ
IIREKKNSFDNKLNDFLELSNQSAAEKMSLEDEIKRCQVSLTSATRRSHSAQVLVVESSR
DQGMCVLYRDLTNAKALLSKLDEAAHRYPTPDVELTRNSCRVNIQDVEKKISSAEAQYQE
QLDQVKNGRRVSELIPIAVSNQPNPPAAPVSVAARQSAATPPPSASHSLPSYSQPSAAAP
HKPPPRTMESAHSTVFEKAMERLVSMFPDYKRPELMRFVQDLRFSSGSSLNNMALQDMVG
GVTQLILDHQEKLNAAKLNAKGCGSPAQCAAPVWQPMGHPRVKHSDALNVEDPCIICHED
MSPDDICVLECRHSFHDKCIRSWLKEQSTCPTCRDHALMPDDFPELSGRRRQAP
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactctgattctgaaattggagaggaatgggaagcgatccataaccgcacgcct
gttaaacttttgaccagaaatgataccgtggtggctctccgtccacaagagatcgttttt
gacaaatggagtcaaattcctcttgaaaccagaagacaagccggggaacggatgagaatt
tgtgcgttctggcttcccctgctgctgcagcgcgacgagcccagcaacccttcctgctgg
gcgtaccaaatagatctgatatcaagtgatactgacgatctggatatgaagcacttgcag
aagatcgagacactagaggccatcctcagagccttggagaaaggaacggttaaaagggac
caaaccaaacacgttatctggatcagcaacatgtttaacttgcgcaccccagaggctctg
aaggatgcgatgtgctggttggagcgaacgggagagcctggcatccgacatcgagtcatg
agcctcgggcatccccagatctgcttcacagcgctgcacgtcatcttcacagagtttgca
aagtacattcagaaaatgggctccgactcggagaagacgatgaaggagctgaatgttcga
ccggctgaatatctaatagagaaaagtgaagaaatgaagaagaaaggaaatgagaacttc
aagaatatgcagtttgaagaagctgtgaagtattattctaaagccatcaaattataccct
gacaaccacttcatttatggaaaccgagcgctatgctatatccgatgtaaaaaatatctc
aaagcggtaactgatggaaaacgtgctactctgataaagccactctgggtgaagggccac
ttccgcttctgtgaggctttgtttttcttgggcgaggggaaaaaggctatcgaagccaac
gtattagcccggggtctttgtaaagacaaccgagacggcatcaaagacctggaagaccaa
cacgagaaattcttattggaaatgccagagcccaaagttgtaccgtctaagaaaaatcaa
agtaaaaaagctcaaactctggagccacggccgctgtctgtaaactctgttcataagaac
gatcctcctccgaagagtaaaacgccagtggttaaaccagaaaagcaacaagtgaaaaat
gaaaagactgtgccgtcagagggcagtactaaaaactccaaaccatcaaaaagtgagcct
cctacgaagaatgggaagggagactccggcacaccaacgaagaagaaaccaaagaacaga
agtccgcctgaagtgaagaagcagaacgagggtgacagtaaaacaggtgcgtgtaaagag
ttgaaagtgatggtgcaggacgctcacagcgcgctgactgacctccgctgccgcaacgca
gagcaggcgttcagaaaggctctgaacatcctggacaccagcacagccaaggaagttggt
ctttctacgctggatgttttgttgttgctgtacggacacgcagcagctctgaccgaaatc
ggccagcctgaggaacttggggaagcacaaaagcttctggtaaagatcaaatcatttgag
gagcggacctttcagtgtctggtttactacgccaccgggagggtgtttctcaaggagaac
aggtttgctgtggctctggagcagttttcagattccctgcagacagtcaaaaataaaata
acgccgggtaaactcacctggcctttaaccaatgagattgtcaaagaaacgcagccggac
tatttcaaggcaatgcttgagcaagctatagagttgtgtacatttcctcctccgcctgac
gccatctgtcgactggagatctgcctctgccccatgaaggcagaaatctacctgactgac
ccagattttaagggctacattagaatcagctgctgtcagagctgcattattgaataccac
atcgcctgctggaaggccctcaagacatcatccttctctgacagaaatgaaaaggatttc
ctacaagagttgtgttttacatcggactgtctgggcaaaatctgcagtatcgtaatcttt
ggtacgacagggctgcccaaatgcacgtttaaagctgccatcaccaaaccctcgactcca
aagaagctcaaagtgaatcagaaatgtacaagtctgaggaagatgaaagcaaaggatgag
cacaaacttaagaggaggcaacataagcagtcattcatagaaaagcagacgatcaacgag
gagattctgctgcagaaagaagactcgacgacacagattgaacagaaagcctggttgctg
tacagggatcgagtcctgctgcagatcagtcagaacctggagctgctcagagaggaaccg
ggcctccaggcgtcagcgctgacccagagtctgaagccctggctggagctggactcatcg
agggggaaccagatcgctgagaggatcctgaactggaagccgatggagacgctcggactg
gtcgtcgagctcctgctggagaggaagaaccgcgtttgggctcgaatcctgatccagctg
ctcagtagctgccgggatataaatcccaaactccacaactgggcgagccacctcaacgac
gcaggtctgaatgctgccaagagcttcattgatcgccacgctggacacttggagacgctg
gacctagcttttttgctcggctttggcccgatgcaggactcaataattgaagagtttgat
attgggccagatcttttttcaaccattggcttgactgagactgaatacctaaaacaggcc
ccgcatgataacatgagactctttatctggactctggaggaacacagagaccagtttctc
tcttgccacgctatactggatgagtattttgatatgatggatggacattgttcagtctta
aaaaagtctgatgaaaatcaaaataattctcctttgaagagtcgagcccggaaaaagaaa
aaaggagcaaacggtgttattgtttggtctggaaacagcagccaaacgcagagagaggaa
tgggaccaagacttttttgaagatgacactttatcattccttcaccccagtgatcccttc
agtgtcccgagtcaccttcgagagcaagtggccacttttgaggaccagtacaacaccacg
agacacagaggtcactataaaaacattttggacaacaaccccgacccgaccaaagagagt
ttgtatgactacttcgctcagatcctggaggagcacggtccgctggtcgctgaggaccct
ctgctggtgggagagctggataacttccccgtcgttgctaaagacaagatccaggaagtg
ggcggcttcgaggtcttcctcctggagtctctgcgcttcataaagatgggacggtgcatc
ggcctggctaaacacgccgtcactctgcagcaggccggacacggagccagtttggacgac
ctggacgatatcaccgatcccgacattgagtatccgtgtcctggtttggacgagggtagt
tttagtgctttccctagcgataagaacggttattcacacgcacagaatgtctatcccatc
ctcccaaatccatatgcatttgcccccctgcctcatgcgcctgcctttgttggagttaat
aattcattttacgcctggagtaatggtgacgatgaaaagcaagacccttactttatacct
gatgacgacggagcgttggatctatttcgcagtgcgggggatcgaggcgtttctgaaaca
tcgtccgtttcatctgatgaaagcgttttgaagaaacatgccgctgtacagacgtgcaat
gagaccgtgaggagtgtagcggtgaatacggagattcatgagccttttgagagctgcccg
ggtgacatcaacaaaaagcaacacagcggaaggatgttagagcagagcatgaaggaaatg
tcgaaagactgcgacaaagtcaacctaacgcacaaagaagacctcgctgtcctggaagaa
gaggttcagcagatcaccaccaacatacaggtgaccattcaggagctggggatgttccag
cagaagttggaggaggaggtgaagaaggaccagaaggagaagagagcgaaccaggagggt
ctgaaggctctgaaggtggagacggaggatctggtgacgcaacacaggagttttacccaa
atcatccgagagaagaaaaacagctttgacaataagttgaatgatttccttgagctgagc
aatcaatcagcagccgagaagatgagtctggaggacgagataaagcgctgtcaggtctcg
ctgacctcggccaccaggaggtctcactccgctcaggtgttggtggtggagagcagtcgg
gatcagggtatgtgtgtcctctacagagatctgaccaacgccaaggctctgctgagcaaa
ctggacgaagcagctcacagatacccaaccccagatgtggaattaacacgaaacagctgc
agagttaacatccaggatgtggaaaagaaaatctcctctgctgaggcgcagtaccaggag
cagctcgaccaggtgaagaacggcaggagagtcagcgagttaattcccatcgccgttagc
aaccagccaaaccctcctgctgcaccggtgtcagttgctgccagacagtctgcagctacc
cccccgccctcagcctctcacagcctcccctcctactcccagccatctgcagccgctcct
cacaaacccccccccagaacaatggagtctgcacacagcactgtgtttgagaaagccatg
gagcgcctggtctccatgttccccgactataagaggccagagttgatgaggtttgttcag
gacctgcgtttctccagcggaagcagtctgaacaacatggctctgcaagacatggtgggg
ggggtgacccagctgatcctggaccatcaggagaagctaaatgcagccaaattgaacgcc
aaaggatgtggcagtccggctcagtgcgccgcgccggtctggcaaccgatgggacacccg
agagtcaaacactctgacgcactgaacgtggaggacccgtgcatcatctgtcacgaggac
atgagtccggacgacatctgtgtgctggagtgccgacacagcttccacgacaagtgcatc
cgctcatggctcaaggagcagagcacgtgtccgacctgcagagatcacgctctgatgccc
gacgacttccccgagctctccggacgcagacgccaagctccatga
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integrated database retrieval system
