KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117459499
Entry
117459499         CDS       T09629                                 
Symbol
cxcl12a
Name
(RefSeq) LOW QUALITY PROTEIN: chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
  KO
K10031  C-X-C motif chemokine 12
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04060  Cytokine-cytokine receptor interaction
pgeo04672  Intestinal immune network for IgA production
pgeo04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    117459499 (cxcl12a)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    117459499 (cxcl12a)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    117459499 (cxcl12a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:pgeo04052]
    117459499 (cxcl12a)
   00536 Glycosaminoglycan binding proteins [BR:pgeo00536]
    117459499 (cxcl12a)
Cytokines and neuropeptides [BR:pgeo04052]
 Cytokines
  Chemokines
   117459499 (cxcl12a)
Glycosaminoglycan binding proteins [BR:pgeo00536]
 Heparan sulfate / Heparin
  Chemokines
   117459499 (cxcl12a)
SSDB
Motif
Pfam: IL8 RPA_interact_N
Other DBs
NCBI-GeneID: 117459499
NCBI-ProteinID: XP_033956195
LinkDB
Position
15:23145593..23151272
AA seq 122 aa
MGPSVTAPLDFTLSRINXQWHYRRMDMKLLALMAALMVVIYAPPSQAKPISLVERCYCRS
TVNSLPRGYIRELRFIHTPNCPFQVIAKLKSNKEVCVNPDIPWLQQYLKNAIKRMKKSRK
GH
NT seq 369 nt   +upstreamnt  +downstreamnt
atgggcccgtctgtcactgctcctctggactttactctgagcaggatcaatnctcagtgg
cattatcgcagaatggatatgaagctgttggcactcatggctgcgctcatggtggtgata
tatgcgcctccatcacaagcaaagcctatcagcctggtggagagatgctactgtcgttcc
acggtcaacagcctcccacgaggctacatccgagagctcaggttcatccacacgcccaac
tgccccttccaagtgattgctaagctgaagtcaaacaaagaagtgtgtgtgaacccagat
atcccgtggctgcagcagtacctgaagaacgccatcaaaagaatgaagaaatccagaaag
ggccactaa

DBGET integrated database retrieval system