Pseudochaenichthys georgianus (South Georgia icefish): 117460244
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Entry
117460244 CDS
T09629
Symbol
arhgef1
Name
(RefSeq) rho guanine nucleotide exchange factor 1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04270
Vascular smooth muscle contraction
pgeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117460244 (arhgef1)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
117460244 (arhgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117460244 (arhgef1)
Membrane trafficking [BR:
pgeo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117460244 (arhgef1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
RGS
Motif
Other DBs
NCBI-GeneID:
117460244
NCBI-ProteinID:
XP_071062062
LinkDB
All DBs
Position
16:complement(38984638..39032783)
Genome browser
AA seq
1075 aa
AA seq
DB search
MNPMQQGEFGAQCSNPAMSIIGAEDEDFENDLNDVTEDQCTHFNNIDLLKSRPTHLLVFM
QHVILQFEPAPLLCYLHADLFKNLSAKETKKQFVEFYNTFLDKGAILRVALPPNVAHELE
RTRADLLHEDTQRRYVQEVQSLQAAEVAKQLEDFRQKRMMGMTPSEADLSDVESHNSTNR
IPREMKERSVAENLLDKMSETQPTIVMDEEKCQSIFSAVAYYMKHLGVKTRAVDSKKSRG
GFFRSKLVKNKRDESSKAKPRGVFPGIPSWIAGNTEVKPKTEAEAEKEKVNPERKGLGPG
RGSVTDSAMPSAPSRKSVSTGSPSSLPGLEVNDGSGNNVSIINSPESSHGDGLSSNRLEP
PCQSEGGDVSPVGLGLGLGLIVGEPLFPMDTSTEDNVEKERRKTSRKVARSESARVDRHP
SRRRGSSRAKQSRSRSDVDLQPPTPVMLIPHHLHPFDGPVLPPEGPGYSPTSPSPQLEEL
EPRLLEFEQDPANWRELAPPEALSSLSKKETKRQEVINELFATEHAHVRMLSVLQMIFYR
PLAREELLTYTDLSAIFPNLDEIIEMHYNFLESLTKLRCQEDHFIVKHISTTVLNRFGGT
EGEWFQKLTARFCSHQSWALDQIKSRQKKEPRFNSFILEAESKPQCRRLQLKDIIPIEMQ
RLTKYPLLLENIAKNTEDLTEKERIQQSAECCRKILNHVNDEVKEMENLLNLKDYQRRLD
TSGLKPSNELYTEYKNIDLTQKKMLYEGLVTWKVTKEKAIEVQCVLLGDLLVLLQRQDDK
MVLKCQSKSNIAVQEGKQMLSPIIKLDSVFLREVATDRKAFYVIFTWESGAQIYELVAQS
IGERKMWTDVIKTAVDDLKKSGAPMRLTPAIGSVLPPLSPSTLTAPLSPTENGGLKSSSD
RDKDSLTDDKSADPRHRLIDFLSDKGFDLIGHSNSDQEKMANSALDEVMSLKRLLVGSIS
LSEDSQPDEENGEEQSQRQETDNCQSTEESQATDRGAEDEEENGDSFEKKGAGTKGEEER
SITAPLVLSRERMEEVCRRLHSLEKQLTRLQTVEEEHHRLQEALSKFSLGGGNFQ
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaatgcagcagggcgagtttggggctcagtgctctaacccagccatgagcatc
atcggggctgaggatgaggatttcgagaatgatctgaatgatgtgacggaggaccagtgc
acccacttcaacaacatcgatctgttgaagtcacggccgacccacctgctggtcttcatg
caacatgtcatcctacagtttgaacctgctcccctgctgtgttacctccatgctgacctc
ttcaaaaacctcagtgccaaagaaaccaagaagcagtttgtggagttctacaacaccttc
ttggacaaaggggccattctccgagtggccctaccaccaaatgtagcccatgaattggaa
cggacccgtgcagatctgctccacgaggacacccagaggcgttacgttcaggaggttcag
agcctgcaggcggctgaagtggccaagcagctggaagatttcaggcagaagaggatgatg
ggtatgacgcccagcgaggctgatctcagcgacgtggagagccacaactccaccaaccgc
atccccagagagatgaaggagaggtctgtggccgagaacctgctggacaagatgtccgag
acgcaacctacaattgtcatggacgaagaaaagtgccaatccatcttctcagcagtggcc
tactacatgaagcacctcggggtgaaaaccagagctgtggacagtaagaagtccagagga
ggtttcttcaggagtaaactggtaaagaacaagagggatgaatcctcaaaggctaaaccc
agaggagtgtttccgggcatccccagctggatcgcaggcaacactgaagtcaaacctaaa
acggaggctgaagcggaaaaggagaaggtgaatccggagcgtaagggtctgggtcccggc
agagggtccgtgactgactctgcaatgccttcagcccccagcaggaagtctgtttccact
ggaagcccctcctccctgcctgggctggaggtcaatgatgggtcaggcaacaacgtcagc
atcatcaacagccctgagtcttcacatggggacggtctctcaagcaatcgcttagagcct
ccatgccagtcggaagggggggacgtgtcccctgtcgggctcgggctcgggctcgggctg
atagtcggggagcccctcttccccatggacacttccacagaggacaatgtggagaaagaa
agacgcaagacaagtaggaaagtggctcgtagtgagagtgcccgtgtggaccggcacccc
tctcgtcgtcggggctcttcccgggccaaacagtcccgttcccgtagcgatgtggacctg
cagccgcctacacctgtcatgctcatcccccaccacctccatcctttcgatggcccagtt
ctcccccctgaggggcccggctactcccccaccagtccctccccccagctggaggagttg
gagccccgcctcctggagttcgagcaggacccggccaactggagggagctggcccctcct
gaagctctgtccagcctcagcaagaaggagaccaaacggcaggaggttattaatgagttg
tttgcaactgagcacgcccatgtgcggatgctgagtgtcctccagatgatcttctacagg
cctttggcgagagaggagctcctgacctacaccgatctctccgccatcttccccaatctg
gatgagatcattgaaatgcactataacttcctggagagcctgaccaaactgcgatgtcag
gaagatcacttcatagtcaaacacatcagcaccacagtgctcaacagattcggaggtacg
gagggggaatggttccagaaattgacagcccgattctgcagtcaccagtcgtgggccttg
gaccagatcaagagcagacagaagaaagagccacgcttcaactccttcatactggaggca
gagagtaagccccagtgccgcaggctgcagctgaaggacatcattcccatagagatgcag
agactgaccaaatacccgctgctgctggagaatattgccaagaacacagaggacctgacg
gagaaggagaggatccagcagagcgcagagtgctgcagaaagatcctcaaccatgtcaac
gacgaggtcaaagagatggagaacctattgaatttgaaggactaccagcgcagactggac
acatcggggctcaagcccagtaacgagctgtatacagaatataagaacatcgacctgact
cagaagaagatgctttatgaaggcctggtgacctggaaagtcacaaaggaaaaggcaatt
gaggtgcagtgtgtgttgctcggggacctgctggtgctcctccagcggcaggacgacaag
atggtcctcaaatgtcagagcaagagcaacatcgctgtgcaggagggcaagcagatgctg
agccccatcatcaagctggactcagtgttcctgcgtgaggtggccacagatcggaaggcc
ttctacgtgatatttacctgggagagcggtgctcagatctatgaactggtggcacagtct
ataggagagaggaaaatgtggacggatgtcattaaaacagcagtggatgatctgaagaag
agtggagcgccaatgaggttgacgcctgctattggaagtgtattgcctcccttgagtccc
tccacgctgactgcccctttgagcccgactgagaacggaggtttaaaaagcagcagtgat
cgagataaggacagcttgacggatgacaagtctgcggacccgaggcacaggttgattgat
ttcctgtcagacaaaggcttcgacttgataggccactccaacagcgatcaggagaagatg
gccaacagtgctttggatgaagtcatgtcgctgaaaaggctgttggtcggcagcatcagc
ctttcagaagactcgcagcccgacgaggaaaacggagaggagcaatcacagaggcaggaa
acggataactgtcagtccacagaagaaagccaggccacagacaggggagcggaggacgag
gaggagaacggtgactcttttgaaaagaaaggtgccgggacgaagggcgaggaggagagg
agcatcaccgcccccctggtgctgtcccgggagaggatggaggaggtctgcaggaggctc
cacagcctggagaaacagctaacgagactacagactgtcgaagaggagcaccaccggctg
caggaggccctttccaagttctcactggggggcgggaacttccagtga
DBGET
integrated database retrieval system
