Pseudochaenichthys georgianus (South Georgia icefish): 117460761
Help
Entry
117460761 CDS
T09629
Name
(RefSeq) toll-like receptor 2 type-1 isoform X1
KO
K10159
toll-like receptor 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04145
Phagosome
pgeo04620
Toll-like receptor signaling pathway
pgeo05132
Salmonella infection
pgeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117460761
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117460761
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117460761
09171 Infectious disease: bacterial
05132 Salmonella infection
117460761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117460761
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117460761
04054 Pattern recognition receptors [BR:
pgeo04054
]
117460761
04090 CD molecules [BR:
pgeo04090
]
117460761
00536 Glycosaminoglycan binding proteins [BR:
pgeo00536
]
117460761
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Phagocytosis
Toll-like receptors
117460761
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of breast milk
117460761
Pattern recognition receptors [BR:
pgeo04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117460761
CD molecules [BR:
pgeo04090
]
Proteins
117460761
Glycosaminoglycan binding proteins [BR:
pgeo00536
]
Hyaluronan
Cell surface receptors
117460761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_5
LRR_9
ThsB_TIR
RNA_pol_Rpb1_6
Motif
Other DBs
NCBI-GeneID:
117460761
NCBI-ProteinID:
XP_033958193
EnsemblRapid:
ENSPGEG00000014115
ENSPGEG00000014117
LinkDB
All DBs
Position
16:43467212..43520449
Genome browser
AA seq
878 aa
AA seq
DB search
MIWRWVHLSALLLGALASPAPSSQRTSNSDGESCHIYRSGRSADCVGRQYEHIPWRQFPS
TLEEIDLSYNKLQAVRVDDFLRLPQLHTLKLQYNNISHIDKDAFKNNTLLEHLNIFNNSL
EEIPAAALSTLLNLKKLYMSNNLYKSATLAHSFSKCVKLKVLSMGGPLVMGLKKADFQPL
KNIKLQEFSIKCSSDLSFYEPGSLEVIQTRDMGFDMAIDQLPYALPFMLQDIANKTFRAI
QFRNIFEFMYYMEDEDIFKGLKDITAQQLVFHRGKFNEHLLSMALMNLQDAPIKRLRLQY
IDFARSPTFVDSRAGSSITDLALDKLELWYISNPDILRFDWRFTWFNKVKELSIQHVYFN
FVPCDAWVEMEVVEILDASNNRLNNNFLFNKQCDYRGAVPNLHTFNMSRNVLTSLRDLSM
LTKEFKQLQVLDFSYNQMGSAETSQDCVWQINITRIIAHHNPFVSDALQCLPTTVQYLDL
SHCDLDQLDMMYFEKATNLKELLLSGNKIKYIPCKWKSQSLQSLSLDGNSFGLISKASFQ
DMPQLSQLRAGNNPFHCTCELHAFVQDTISKAKVNLTDWPWNYRCYHPEALLNTVISKFF
PNQVACDTRLVIIICVVTTAAVILILMLICYIFDLPWYTKATYQIIRAKYRYHKEKAAGE
LEDCTYHAFISYSHSDADWVREQLLPSLENNKNPYRLCIHERDFMPGKWIIDNIIDNIES
SRKVIFILSRHFVNSEWCNYELYFTQQRAMGKTFGDVILVMMEPMDARSIPSKYCRLKKM
LSTKTYLEWPQQVNLQAFFWAQLRSVLGKPTMTREERHSVRSRALSVGEVSVIGPPIEDT
RPKGATPNADKEAVPKDEIIKRNNCELSNQRQIPLVAL
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgatatggagatgggttcatttaagtgctcttcttcttggagcactcgcgtccccagct
ccatcctcccaacgcacctctaacagtgacggagaatcctgtcacatctacagatctggc
cgctcagcagactgtgtgggaagacagtacgaacatatcccgtggagacaatttccatcc
acactggaagagatagatctctcttacaataaacttcaagctgtccgtgttgacgacttc
ctccgcctccctcagcttcacaccctaaagctgcagtacaataacatttcacacattgac
aaagacgcctttaaaaacaacacgctgctggagcatcttaacatcttcaataactccctg
gaggaaattcctgccgcagctttgtctactctgttgaatctgaaaaagctctacatgtcc
aataacctttacaaaagtgcgactttggctcatagcttttccaaatgtgtcaaactgaaa
gttctgtctatgggtggccctctggtgatgggtctaaagaaagctgattttcagcccctg
aagaacattaagttacaggagttttcaattaaatgttcatccgatctaagtttctacgag
cctggaagtttagaagtcatccagacaagagatatgggctttgatatggccatagatcaa
ctgccatatgctcttcccttcatgctacaggacattgccaacaagaccttcagggccatc
caattccgaaacatctttgagttcatgtactacatggaagacgaggacattttcaagggt
ttgaaagacatcacagcccaacagctcgtctttcacagaggcaaattcaatgagcatctc
ctcagtatggctttgatgaacttacaagacgcccccataaaaaggctgagacttcagtac
atcgactttgcccgttcacccacgtttgttgatagcagagctggttccagcatcaccgac
ctggcactggataagttggagctttggtacatcagcaaccctgatatcctgagatttgac
tggcgcttcacctggttcaacaaagttaaggaactgtccattcagcatgtgtacttcaac
ttcgttccctgcgatgcttgggttgagatggaagttgtggagatactggatgcctccaat
aatcgtctcaataataatttcctgtttaacaaacagtgtgattacaggggcgccgtgcca
aatcttcacaccttcaacatgagcagaaatgtcctgaccagtttaagagacttgtcaatg
ctaacaaaggagttcaagcagctgcaggtattggattttagctacaaccagatgggatct
gctgaaacaagtcaggactgtgtttggcaaataaatatcaccaggattatagctcaccac
aatccatttgtaagtgacgctctgcagtgtctgcccaccacggtgcagtacttggacttg
tcccactgcgacctcgaccagctggacatgatgtactttgagaaagccaccaacctgaaa
gagctcctgttaagtggaaataaaatcaagtatataccatgtaagtggaaaagtcagtca
ctgcagtcactatctttggatgggaattcgtttggtctcattagcaaggcgtctttccag
gatatgcctcaactatctcagctgagggcagggaacaatcctttccattgcacctgtgaa
ctccatgctttcgtccaggatacgatttcaaaggcaaaggttaacctgaccgactggcct
tggaactacaggtgttaccatccagaggccttgctaaacacagtcatatccaaattcttt
ccaaatcaagtggcctgtgacaccagactagtgatcatcatctgtgtggtgaccactgca
gcagtgatcttgatattaatgctgatttgctatatttttgacctgccgtggtacactaaa
gcaacgtatcagatcatccgggccaaatacagatatcacaaggaaaaggcggcgggggaa
ttggaggattgtacttatcatgcctttatatcatacagccactctgatgcagactgggtg
agggaacagctcttacccagtttagagaacaacaagaacccttaccgtctgtgtattcat
gagagggacttcatgccaggaaagtggatcatcgataacatcattgacaacattgaaagc
agccgtaaggtaatattcatcctctctcggcactttgtgaacagcgagtggtgcaactat
gagctgtacttcactcagcagagagcaatgggaaagacctttggggatgtcattcttgtg
atgatggagcccatggatgccaggtccattcccagcaagtactgcaggctgaagaagatg
ctcagcaccaagacatacctggagtggccccagcaggtcaacctgcaggcgtttttctgg
gcacagctgaggagtgttctgggcaagccgacaatgacccgagaggagaggcacagcgtt
aggagcagagcgttatctgtgggcgaagtttctgtgattgggccccccatcgaagatacc
aggcccaaaggagcaacacctaatgcagacaaagaagcagtaccaaaagatgagatcata
aaaaggaacaattgtgaactttccaatcaaagacaaattcctctagtggcactctga
DBGET
integrated database retrieval system
