Pseudochaenichthys georgianus (South Georgia icefish): 117461049
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Entry
117461049 CDS
T09629
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117461049 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117461049 (nthl1)
Enzymes [BR:
pgeo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
117461049 (nthl1)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117461049 (nthl1)
Prokaryotic type
117461049 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
MMTV_SAg
Motif
Other DBs
NCBI-GeneID:
117461049
NCBI-ProteinID:
XP_033958657
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All DBs
Position
1:complement(17606974..17609751)
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AA seq
449 aa
AA seq
DB search
MPQVHWKTNFCYVVRTLTMTSPYFMQSRPVITRSGDQNAASLRSKLTTRRRNQGPGSSVE
VKVEPEEARISEQRPSSAPLSTAEARQPQPHLLTCSHVVCFLYVFLCWVRYSKSSLPCAH
SGACHPKTETDALPLSSHSRRRKQLKVEYDEDEGVPPVKTEHWEPPDWKKQLGYIREMRS
SRDAPVDNMGAEKCYDSDATAHVRRFQVLVSLMLSSQTKDQVTAAAMKRLRAHGCTAESI
LNTDDEALGKLIYPVGFWRTKVKYLKLTSAILQKEFGGDIPDSVQGLVRLTGVGPKMAHL
AMDIAWDQVSGIGVDTHVHRISNRLGWLKKPTTSPEQTRKALEEWLPRELWSEINWLLVG
FGQQVCLPVRPLCSVCLNQHSCPSAHKSSPTKRPKAASPCSPDPTSASTVKTEPGQESDV
KHERLKKEPLPTPVSPNAPKRKIKTKVKY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggtccactggaaaacgaatttctgttatgtagtccggactttaactatgacc
tctccttatttcatgcagagcagacctgttatcactcggagtggtgatcaaaatgcagcc
tctctcaggtccaaactcaccaccagacggaggaatcagggtccaggttcctctgtggag
gtgaaggtagagccggaggaggcgaggatctcggagcaaagaccctcctcggccccctta
tccacggcagaggcaaggcaacctcaacctcatctacttacttgttcccatgtggtatgt
tttctttatgtatttctgtgctgggtcagatattctaaatcctctctaccctgtgctcat
tctggtgcttgccatccaaaaacagaaacagacgccttgccattgtcttcacacagccgc
aggaggaaacagctcaaagtggaatatgatgaggatgaaggtgtaccaccggtgaagaca
gaacactgggaacctcccgactggaagaaacaactgggatacatccgtgagatgaggagc
agccgggatgcacctgtagataacatgggggcagagaaatgctacgactcagacgctact
gctcatgtcagacgtttccaggtgttggtttcactcatgctgtccagtcaaaccaaggac
caggtgaccgcagcagccatgaagaggctccgagctcacggctgcactgcagaaagtatt
cttaatactgacgatgaagcactggggaaactcatctaccctgtcggcttctggaggact
aaggtgaaatatctgaagctgacatcggccattctgcagaaagagtttggaggggacatc
ccagacagcgtgcaggggctggtccgcctaacaggagtcggacctaagatggctcatctg
gctatggacatcgcatgggaccaggtgtccggcatcggcgtggacacacacgtgcatcgt
atctctaacaggctgggctggctgaagaaaccgaccacgagcccggagcaaacgcgcaag
gccctggaggagtggttaccaagggagctgtggagtgagatcaactggctgctggtgggt
ttcgggcagcaggtgtgcctccccgtcaggccgctctgctccgtgtgtctgaaccagcac
agctgtccctccgcccacaagagctctcctacaaaaaggcctaaagctgcttccccttgc
tcccctgatccaacctctgcctccacagtgaagactgaacctggacaagaatcagatgtt
aaacatgagaggttaaagaaggagccactgcccacacctgtttccccgaacgcaccgaaa
cggaagataaaaaccaaggttaaatattga
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