Pseudochaenichthys georgianus (South Georgia icefish): 117461791
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Entry
117461791 CDS
T09629
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
pgeo04520
Adherens junction
pgeo04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117461791
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117461791
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117461791
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117461791
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117461791
Protein phosphatases and associated proteins [BR:
pgeo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117461791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
ig
Interfer-bind
Tc-R-P
PTP-SAK
V-set
DSPc
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Ig_C17orf99
Fn3_PTPRU
DUF4998
Motif
Other DBs
NCBI-GeneID:
117461791
NCBI-ProteinID:
XP_033959615
LinkDB
All DBs
Position
17:complement(32217686..32390942)
Genome browser
AA seq
1932 aa
AA seq
DB search
MVPNIHLAAPLVPRGALLFLLLLTCLVFSSHADSMPSFVKSPEDQTGISGGVASFVCLAT
GEPKPRITWKKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECKASNSAGEID
TSAKLTVLEETQIPHGFPTIDMGPQLKVVEKTRTATMLCAASGNPDPEITWYKDMLPVDI
SSSNGRIKQLRSGGTPIRGALQIEISEESDQGKYECVALNSAGTRYSSPANLYVRVRRVP
PRFSIPPTNQEVMPGGSVNLTCVAVGSPMPYVKWKTGETDITKEEDMPMGRNVLEVIKIL
VSANYTCVAISPLGMIEATAQVTVKALPKPPASLIVTETTATSVTLTWDSGNPEPVSYYM
IQYKAKSLENGFQEVEGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDPVETRTGEQ
APSSPPLHVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYSSDLTAPLSAWQKHNTDDSS
LTTISGLTPDITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSSFEADAELDNRIMLT
WLWPVQDPITKYELEYWESGSETKIHVIFDPAGSYAVDGLKPDTSYRFSLAARSEMGLGV
FTQPIEARTAQSTPSAPPQDVHLVSLSSTSLKVSWVAPPAASRHGAIVRYTVSYQAMAGE
DTERHEVPDIGTDASSLLLEGLEKWTEYQVWVRAHTDVGPGPESAPVRMKTREDVPGAPP
RRLEVEAINSTAIRVTWKPPLQGKQHGQIRGYQVIFSRLENGEPRGQPNIMDVALPEAQW
NIEESTEHEAIIAELHSETTYSVTVAAYTTKGDGARSKAKVITTTGAVPGKPNMMISTTS
GTTSGNTALIQWQPPKEMVGELMGFQLQYKRTDEETYTSRELRKTEEHYTVTGLHKGATY
VFRLSARNRAGIGEAYTKEIGTAEDVPSGFPFNLQVTGLTQSSTQLTWEPPLVAERNGKI
VYYLVVYRDINSQQNSTNRTSDTHMTIHGLNPDTTYDIRVQAFTSKGGGPLSPSIQSRTM
SIDFPTLNFGVKAVMKTSVLLTWDLPANYKSQVPFKILYNQQSVEVQGNLKRKLISQLQP
DTDYSFVLTSRGNIAGGLQQQVSIRTAPDLIKTKPNPLQAEGGKMTINLPKVQTTTRVRW
YYIVVMPVSPSTPQWKNPDEMDLDELLKSSEGPALRRRRHLDSSKPYIAAKLASLPTSFI
VGDEKMNNGFYNKPLAGAQKYLFFVLAVLRNEGTDSTSNYMTFSASPYSDPIQVSTSMTQ
DMEQPEMLWVMGPVLAVVLIILIVIAILLFKNSKQERKRASPLPKDEQSGGVKDSLLANS
SDPVEMRRLNYQTPGPSSHRCPNTPRMREHPPIPVTDLADHIERLKANDGLRFSQEYESV
DPGQQFTWENSNMEVNKPKNRYANVIAYDHSRVVLTSVDGKGSAVPGSDYINANYIDGYR
KQNAYIATQGPLPETLSDFWRMVWEQRSNTIVMMTRLEEKSRVKCDQYWPSRGTETYGMI
QVTMLDTVELATYSVRTFALYKNGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKA
CNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERMKLEKSVDIYGHVTCMRAQRNYMVQTED
QYIFIHEALLEAATCGNTEVPARNLYAHIQKLTQPPPGETVTAMELEFKRLANSKAHTSR
FISANLPCNKFKNRLVNIMPFESTRVCLQPIRGVEGSDYINASCIDGYRQQKAYLATQGP
LAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMP
QYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPI
TVHCSAGVGRTGVFITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAA
LEYLGSFDHYAT
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaatattcacctggcagcgcccctcgtgcccagaggggcgttgctattcctg
cttctactcacctgcttggtgttctcctctcatgcagacagcatgccgagtttcgtcaag
tccccagaagaccagacgggcatctcaggaggagttgcgtcctttgtgtgcctggccacc
ggggagcccaaacccagaatcacctggaagaagaaaggcaagaaggtcagctcccagcgc
tttgaggtgattgagtttgatgatggctcgggctccgtactgcggatccagccactgcgc
acacacagagacgaagccatttacgagtgcaaagccagcaacagtgctggcgagatcgac
accagcgccaagctcacagtgcttgaagagacccagatcccccatggcttccccactatc
gatatgggtccccagctgaaggtggtggagaagaccagaactgccaccatgctgtgtgcc
gccagcggaaacccagacccagagataacctggtacaaggacatgcttcctgtggacatc
agcagcagcaacgggcgcattaaacagcttcgttcaggtggtacaccaattagaggagct
ctgcaaatcgagatcagcgaggagtccgaccaaggaaaatatgaatgtgttgccttgaac
agcgctgggacccgttactcatctcctgccaatctctacgtacgagtacgaagagtccca
cccagattctccattccccccaccaaccaagaggtgatgccgggcggcagcgtcaacctg
acatgtgtggcagttggctcgcccatgccctatgtaaagtggaagactggggaaactgat
atcaccaaggaggaggacatgcctatgggacgcaacgtgctggaggtcatcaaaatcctc
gtgtcggccaactacacctgcgtggccatctcccctctgggcatgatagaagccaccgcc
caggtcactgtcaaagcattgccaaagccccccgcctccctcattgtgacagagaccaca
gccacgagtgtgactctcacctgggactctgggaacccagaacccgtctcctactacatg
atccagtacaaagccaagtccttagagaatggcttccaggaagtggaaggtgtggcaact
acccgttacagcattggtggacttagcccctactccgagtatgagtttcgtgtcatggct
gtcaacaacattggccgtgggccgccaagtgaccccgtggagactcgcaccggtgagcag
gccccctcctcgccacctctgcatgtccaagcgcgcatgctgagtgccagcacaatgctg
gtgcagtgggaaccgcccgaggaacccaacgggcagatccggggctaccgggtttactac
agctcggatctgactgctccgctcagcgcctggcagaaacacaacaccgacgacagcagc
ctgactaccatctcaggcttgactcctgatatcacctacagcctcagggtgctgggcttc
acctctgtaggagacgggcccccttctgacgtcctgcaagtcaaaacccagcagggagtc
cctgcccagccgtccagctttgaggccgatgccgagctcgacaaccgcatcatgctaaca
tggctgtggcccgttcaggaccccataactaagtatgagctggagtactgggaatccggc
tcggagaccaagatacatgtgatcttcgacccagctggctcctatgctgttgacggtctg
aagcctgacacctcgtaccgcttctctctggcagcccgatcagagatgggtttaggcgtc
ttcacccagcccatcgaggctcgcaccgcccagtccaccccatccgccccccctcaggat
gtacacctggtcagcctgagctccaccagcctcaaggtgagttgggtggccccgcccgcc
gctagccgccacggcgccattgtgcgctacacagtcagctaccaggccatggcgggggag
gacacggagcggcatgaggtgccagacatcggaacagacgcctccagcctattgctggaa
ggcctggagaagtggactgagtatcaggtgtgggtgagggctcacactgacgtgggcccg
ggccccgagagtgccccagtgaggatgaaaaccagagaggatgtgccgggagcacccccc
aggaggctggaggttgaggccattaactccacagcaatccgggtaacctggaagccgccc
ctgcaggggaagcagcacggtcaaatccgaggctaccaagtcatcttctctcggctggag
aacggtgaacctcgtggccagcctaacatcatggacgtggctctgccagaggcacagtgg
aatattgaggagtccaccgagcatgaggccatcatagctgaactgcactctgaaaccacc
tactctgtcactgtagcagcgtacaccaccaagggagatggagctcgcagcaaagctaaa
gtcatcaccacgactggagcagtgccaggcaagcccaacatgatgatcagcaccaccagt
ggcaccaccagtggcaacacagcgctgatccagtggcagcctcctaaggaaatggtgggt
gagctgatgggcttccagctgcagtacaagcgcaccgacgaggaaacctacacctcccgc
gagctgagaaagaccgaggaacattacaccgtcaccgggctgcacaaaggcgccacatac
gtcttccgcctcagcgcccgtaaccgcgcaggcatcggcgaggcctacacgaaggagatc
ggcaccgctgaagacgtgccctcaggcttcccgttcaacctccaggtgacaggactgacc
cagtcctccacacagctgacctgggagccgccgctggtggccgagaggaacgggaagatt
gtgtactacctggttgtgtacagggacatcaacagccagcagaacagcaccaaccgcacc
tcagatacgcacatgacaatccatggcctaaatcctgacaccacctacgatatccgagtg
caggccttcaccagtaagggcgggggaccgctcagccccagcatccagagcaggaccatg
tccattgattttcccaccttaaactttggtgtcaaagctgtcatgaaaacatctgtcctc
ctaacctgggatttgccagcaaactacaaatcccaagtgcctttcaagatcctgtacaac
cagcagagcgtggaagtgcagggaaacctgaagaggaagctgatctcgcagctgcagcca
gacacagactactcctttgtgctgacaagcaggggcaacattgctgggggtctgcagcag
caggtgtccatccgcactgcccctgacctgatcaagaccaagcccaacccacttcaggct
gagggtggcaagatgaccatcaacctgccaaaggtccagaccaccacacgtgtcaggtgg
tactacatcgtggtcatgcctgtgtccccgtcaacgccgcagtggaagaatccagacgag
atggacctggacgagctgctcaagtccagtgaaggccctgcactgaggcgccgacgtcac
ctggactcctccaagccttacatcgctgccaagttggcctccctgccaaccagcttcatc
gtgggggatgagaagatgaacaacggcttctacaacaaacccctggccggagcgcagaag
tatctcttctttgtcctggctgtgctccgaaacgaagggacggacagcacttctaattat
atgacattctcagcaagtccctattcagacccgatccaggtctcgacgagcatgactcag
gatatggagcaacccgaaatgttgtgggtcatgggcccggtgctggctgtggtcctcatc
attttaatcgtcatcgccatcctgctctttaagaacagcaaacaggaaaggaagcgggcg
tctcccctacctaaagacgagcaatcaggtggggttaaagactccctgctggccaactcc
tccgacccagtggagatgagaagactcaactaccagaccccaggtcccagctctcatcgc
tgccccaacactccaagaatgagggaacacccacccattcctgtcactgacctggccgac
cacatagagcgactgaaggccaatgacggcctccgcttttcccaggagtatgagtccgtt
gatccggggcagcagtttacctgggagaactccaacatggaagtcaacaagccaaagaat
cgctatgcaaacgtcatcgcctatgaccactccagagtggtgctcacctctgttgatggt
aagggctcagcggttccaggcagtgactacatcaacgccaactacatcgacggctacagg
aagcagaatgcctacatcgccactcaggggccgctgccggagaccctgagtgacttctgg
aggatggtgtgggaacaacggtccaacaccatcgtcatgatgacccgactggaggagaag
tcccgggtgaagtgtgaccagtactggccgtcgcgaggaacagagacctatggaatgatc
caggtcaccatgctggacaccgtggagctggctacttacagcgtccgcactttcgccctc
tacaagaacggctccagtgagaagagagagctgagacagttccagttcatggcctggccg
gaccacggggtgcccgagtaccccacccccatcctggccttcctacggcgggtaaaggcc
tgcaatcctccagatgcaggccccatggtggtccactgcagtgcgggggtgggcaggact
ggctgcttcatcgtgatcgatgccatgctggagcgcatgaagctcgagaagtctgtggac
atctacggccatgtgacgtgcatgcgtgcccagaggaactacatggtccagaccgaggac
cagtacatctttatccacgaagctctgctggaggccgccacctgcggcaacacggaggtc
cccgcacgcaacctgtacgcacacatccagaaactcacccagcccccgcccggcgagacg
gtcactgccatggagctggagttcaagagattggccaactccaaagcccacacgtcacgc
ttcatcagcgccaacttgccctgcaacaagttcaagaaccgcctggtcaacatcatgcct
tttgagtccacgcgcgtctgcctgcagcccatccgtggcgtcgagggctccgactacatc
aacgccagctgcatcgacggctacagacagcagaaggcctacctggccacccagggcccc
ctggcggagaccaccgaggacttctggaggatgctgtgggagcacaactccaccatcgtg
gtcatgctcaccaagctacgggagatgggacgggagaagtgccatcagtactggccagcg
gagcgctcagccaggtaccagtactttgtggtggaccccatggccgagtacaacatgccc
cagtacatcctcagagagttcaaagtcacagatgccagggacggacagtccagaacaatc
cgccagttccagttcactgactggcccgaacaaggagtgccaaaaactggagaaggcttc
attgatttcattggacaagtgcacaaaaccaaggaacagtttggacaggacggaccaatc
actgtgcactgcagtgccggtgtgggcaggaccggcgtcttcatcacgctcagcatcgtg
ctggagaggatgaggtacgaaggagtggtcgacctcttccagacggtgaagacgcttcgc
acccagcggcctgccatggtgcagaccgaggaccagtaccagctgtgctacagggcagcg
ttggagtacctgggcagctttgaccactatgcaacataa
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integrated database retrieval system
