Pseudochaenichthys georgianus (South Georgia icefish): 117462626
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Entry
117462626 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00052
Galactose metabolism
pgeo00510
N-Glycan biosynthesis
pgeo00513
Various types of N-glycan biosynthesis
pgeo00514
Other types of O-glycan biosynthesis
pgeo00515
Mannose type O-glycan biosynthesis
pgeo00533
Glycosaminoglycan biosynthesis - keratan sulfate
pgeo00601
Glycosphingolipid biosynthesis - lacto and neolacto series
pgeo01100
Metabolic pathways
Module
pgeo_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
117462626
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
117462626
00513 Various types of N-glycan biosynthesis
117462626
00515 Mannose type O-glycan biosynthesis
117462626
00514 Other types of O-glycan biosynthesis
117462626
00533 Glycosaminoglycan biosynthesis - keratan sulfate
117462626
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
117462626
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pgeo01003
]
117462626
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117462626
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117462626
Enzymes [BR:
pgeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
117462626
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
117462626
2.4.1.90 N-acetyllactosamine synthase
117462626
Glycosyltransferases [BR:
pgeo01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
117462626
Membrane trafficking [BR:
pgeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
117462626
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of breast milk
117462626
BRITE hierarchy
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
117462626
NCBI-ProteinID:
XP_033960788
LinkDB
All DBs
Position
17:complement(36716984..36728542)
Genome browser
AA seq
365 aa
AA seq
DB search
MVLGSLSPTLRRFSCELVWLVCFLQVSVILFCSHRSLDPPWGQNQQADPSVQNQQENRAK
RNQDRPTDPPRGEEAGEPGDKGQNPGGKAVGPGGKELQHCPGTAPLLVGPLQVEFSSPVK
LIKKQNPTLQPGGRFRPRDCVAQQKVAIIIPFRNREEHLKYWLNYLHPILQRQQLDYGVY
VVNQDGEGSFNRAKLLNVGYTEALKDYDYDCFVFSDVDLIPMDDRNIYRCFSQPRHLSVA
VDKFGFRLPYTQCFGGVSSMSKEQFLKINGFPNNYWGWGGEDDDIFNRFSYKGMSISRPS
GEIGKYRMIRHNGDKNNKPNLQRFSRIAHTLETMSSDGISSLSYSLVKKEKLDLYTRIHV
DVGGP
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcggctccctctcccccacgctccgccgcttctcctgtgagctggtctggctg
gtgtgtttcctccaggtctccgtcatcctcttctgcagccaccgctctctggaccccccg
tggggccagaaccagcaggccgacccctccgtccagaaccagcaggaaaacagggccaag
aggaaccaggaccgacccaccgaccccccccgcggagaggaggcaggagagcccggggat
aaaggacagaaccccggggggaaggcagtgggtcccggggggaaggagctccagcactgt
cctggaacagcccccttgctggtgggtcccctccaggtggagttcagctctccggtgaag
ctgataaagaagcagaaccccaccctgcagccgggggggcgcttcagacccagagactgt
gtggcgcagcagaaggtggccatcatcatccctttccgcaaccgagaggaacacctgaag
tactggctgaactacctgcaccccatcctgcagagacagcagctggactacggggtgtac
gtcgtcaaccaggacggagagggctcctttaatcgagcgaagcttctgaacgtgggctac
accgaggctctgaaggactacgactacgactgcttcgtgttcagcgacgtggacctgatc
cccatggacgacagaaacatctacaggtgcttcagccagcccagacacctgtccgtggcc
gtggacaagttcggattcaggttaccctacactcagtgctttggaggtgtgtcctcgatg
agcaaagagcagttcctgaagatcaatggctttccaaacaactactggggctgggggggg
gaggacgacgacatctttaacaggttctcatataaaggaatgagcatctcccggccgagt
ggcgagatcgggaagtatcggatgatccggcacaacggagacaagaataacaagcccaac
cttcagaggtttagccggattgctcacacgctagagaccatgtcctcagacgggatctcg
tccctctcctattcgctggtgaagaaggagaagctggatctctacacccggatccatgtg
gacgtgggggggccatag
DBGET
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