Pseudochaenichthys georgianus (South Georgia icefish): 117464921
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Entry
117464921 CDS
T09629
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04140
Autophagy - animal
pgeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117464921 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117464921 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117464921 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117464921 (plekhm1)
Membrane trafficking [BR:
pgeo04131
]
SNARE
SNARE associated proteins
Others
117464921 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
117464921 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
117464921
NCBI-ProteinID:
XP_033963578
LinkDB
All DBs
Position
19:complement(10891770..10910014)
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AA seq
1060 aa
AA seq
DB search
MLATQMPDTPPEAKDVKQIKDKLAQSLKALQKRYVTSDTVVTSEDSDANLLCCALEAIFI
HGIKSKYVRSEAGGRSRKGGRCPLPQPFFWSLLKTVTHRDVVTELEKISFVGTEVGRCRA
WLRLALNHGLMECYLASLFREGSKLRGHYQPSALLLNTEEREVLLSYLQGLASLTFNLSY
KSAVLNEWTTTPLALAGLCPMSQADTVELPLNGVDHPTAKSVNKEWDTVSQSSGSSDAQD
MQRGCPGKGTGVLQGGRNAMNSSNVSLDTTGSSQLSSSLSSDSLLQGQDPRSPTGEPWSS
YDLDMPINVNISTKRLQKDSPTEFRESGHCSQDSMREDSFVSSTDPDQNSETAVFSGSDS
ETQGPPSSSQDLVDPLPKSDSEPSPTSNENHVDYTLPEVCNNTSAELPLDTYSEPVESVE
EEHANLSHETTEPEQEEEEETPEPSVHPGSSRSLSILSSKLSTGSLSHSRSWISEDDIYM
PRLEEVPEQSEAPPPAPPAEPSQSPPGVVHRRQRGLFNPFRGLLKLGQLERRGSMGMWRD
NYCELSPYEFRLYLNAEERACSDNCSLLRCEEARIASPEGRFEVAFPGKRLYLRAANRDE
AEDWVDRIVEAVKKCRPASRADDQWEVLVPTTENGVDALSPTSTPSSPERTSLASDTGTG
GGQEAPPPLQEFDWTRTADIETDAIKETVLYFSNDPEARTWSPLVFSLSLEALKSFRVQE
GRKLLRQTHQIEEIRDVVPDVSLGGPAFFKLLTVRDTLRLRAENPEEARSWRVLIRGALD
SYLESGEDGGSVEPAVGTGNLHRLVQHRLKEDGALLVNLCTVPSEKGLDTQSFKCAGCPQ
QIGPSRGRARLCEFTRQYYCDSCHHGDTSIIPSRMVHNWDVAQREVCKKALHLLAQVEQE
PLLNLDQLNPELVKHADPMSEAHVLRQRLRLLGDYLLTCRSGACKKLQARMEQRTYLLES
SHLYSVLDLRQIAEGQYANYLLTLLQYASNHVFHCDLCTQRGFICQICHANDIIFPFQFD
ITTRCKDCKAVFHLACKAAGVSCPRCQRMKKYLERDLRIC
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgctagctacacagatgccagatacgccacctgaggctaaagatgtcaaacagatcaaa
gataagctggcacagtcgctcaaggcccttcagaagcgatatgtgacgtcagacacagtg
gtcaccagcgaggacagcgatgctaacctgctctgctgtgcgctggaggccatcttcatc
cacggtatcaagagcaagtacgtccgctctgaggctgggggccggagtcggaagggaggc
agatgtccgctcccacagcctttcttctggagcctcctcaagaccgtcacccatcgtgat
gtggtcactgagctggagaagatcagcttcgtgggaacagaggtgggtcgctgccgagcg
tggctgcggctggccctcaaccacggcctgatggagtgctacttagcatcactgtttcgt
gagggctccaagctgcggggccactaccagcccagtgccttgctcctgaacactgaggag
cgggaagtcctgctcagctacctccagggtctcgcctctcttacgttcaacctatcctac
aagtctgctgtcctcaacgaatggaccaccacgcctctggctctcgccggactctgcccc
atgtcccaggcggacacggttgaactgcctctcaacggcgtagaccaccccaccgccaaa
tctgtaaacaaagaatgggatacagtgtcgcagtcgtcaggctcttcagatgcacaggat
atgcagagagggtgcccagggaaaggcacaggggtattacaagggggcaggaatgcaatg
aactcctcaaatgtaagcctggacaccacgggttcctcgcagctctcctccagcctgagc
tctgacagcttgctgcaggggcaggacccccgcagccccacaggagagccctggtcctca
tacgacctggacatgcccataaacgtcaacatcagcaccaagaggctgcagaaggattct
ccgacagagttcagggagagcggacactgcagtcaggactccatgcgtgaagactccttc
gtctccagcacggatcccgaccagaactcggagacggccgttttcagcggctccgacagc
gagacccagggtcccccttcttcatcccaggacctcgtagaccctcttccaaaatctgat
tcagagccctcgccaacatctaatgagaatcatgttgactacactctgcctgaagtgtgc
aacaatacctctgctgagctccctttggacacatacagtgagccggtggagtctgtagaa
gaagaacatgcaaacctttctcatgagactacagagcctgaacaggaagaagaagaagaa
actccagagccttcagtgcatccaggctcaagtcgctccctcagcatcctaagcagcaaa
ctgtccacaggttctctatcacattctcgttcctggatctctgaggatgacatctacatg
ccccgtctggaggaggtgccggagcagagcgaggcgcctcctcctgcccccccggctgag
ccctctcagtccccccccggcgtcgtccatcgcagacaaagagggctgttcaacccgttc
cggggcttgctgaagctcggccagctggagcggcgcggttcgatgggaatgtggcgcgat
aactactgtgagctgtcgccctacgagttccggctgtatctcaacgcagaggagcgcgcc
tgcagcgacaactgctccctgctgcgctgtgaggaggctcgcatcgcctcacccgagggc
cgcttcgaggtggccttccctgggaagcggctgtacctccgggcggccaatcgggacgaa
gccgaggactgggtggaccggatcgtagaagccgtcaagaaatgccgtccagcatctcgt
gctgacgaccaatgggaggttctggtacccaccactgagaacggtgtggatgcgttgtcc
ccgacctccaccccctccagccctgagcgcacttcactagcctctgacacagggacaggg
ggggggcaggaggcgcctcctcctctacaggaatttgactggactcggactgctgatata
gaaacagatgcgatcaaagaaacagttttgtacttctccaatgatcccgaggctcggaca
tggtctcctctggtcttctccctctctttggaggccttgaaaagtttccgggtccaagag
gggaggaagctgctgcggcagacccaccagattgaggaaatccgggacgtggtgcctgac
gtctctctgggagggccggcctttttcaaactgctgactgtcagggacacgctgagactc
cgagcggagaacccggaggaggctcgctcctggagggttctgatccgcggagctttggac
tcgtacctggagagcggggaggacggaggctccgttgagccggctgtggggactggaaac
ctccacaggctggtgcagcacagactcaaagaagatggagccctgcttgttaatctgtgc
actgtgccctcagagaaggggctcgacactcagagcttcaagtgtgcagggtgtcctcag
caaattggcccatcccgaggcagagcccggctttgtgagttcacacgacagtactactgt
gactcctgtcaccacggcgacaccagcattatcccttcacgcatggtgcacaactgggac
gtcgcacaaagagaggtgtgtaagaaggccctgcatctgctggctcaggtggagcaggag
cctctgctgaacctggatcagctgaaccctgagctggtgaagcacgcagaccccatgtct
gaggcccacgtgctgcggcagaggctgcgcctgctgggagactacctgctcacctgccgc
agtggagcctgcaaaaaactccaggccagaatggagcagcggacgtacctgctggagtcg
agccatctgtacagcgtgctggacctgcgacagatagcagagggtcaatatgcaaactac
ctgttgacactgctgcagtacgcctccaaccacgtgttccactgtgacctgtgcacgcag
cgcggcttcatctgtcagatctgccacgccaatgacatcatcttccccttccagtttgac
atcaccaccaggtgtaaagattgtaaggcggtgtttcacctggcctgcaaagctgcgggt
gtttcatgtcctcgctgtcagcggatgaagaaatacctggagagggatctgcggatctgc
tga
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