Pseudochaenichthys georgianus (South Georgia icefish): 117465464
Help
Entry
117465464 CDS
T09629
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00052
Galactose metabolism
pgeo00510
N-Glycan biosynthesis
pgeo00513
Various types of N-glycan biosynthesis
pgeo00514
Other types of O-glycan biosynthesis
pgeo00515
Mannose type O-glycan biosynthesis
pgeo00533
Glycosaminoglycan biosynthesis - keratan sulfate
pgeo00601
Glycosphingolipid biosynthesis - lacto and neolacto series
pgeo01100
Metabolic pathways
Module
pgeo_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
117465464
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
117465464
00513 Various types of N-glycan biosynthesis
117465464
00515 Mannose type O-glycan biosynthesis
117465464
00514 Other types of O-glycan biosynthesis
117465464
00533 Glycosaminoglycan biosynthesis - keratan sulfate
117465464
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
117465464
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pgeo01003
]
117465464
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117465464
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117465464
Enzymes [BR:
pgeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
117465464
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
117465464
2.4.1.90 N-acetyllactosamine synthase
117465464
Glycosyltransferases [BR:
pgeo01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
117465464
Membrane trafficking [BR:
pgeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
117465464
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of breast milk
117465464
BRITE hierarchy
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
ISK_Channel
Glyco_tranf_2_2
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
117465464
NCBI-ProteinID:
XP_033964160
EnsemblRapid:
ENSPGEG00000017758
LinkDB
All DBs
Position
20:3485340..3489723
Genome browser
AA seq
350 aa
AA seq
DB search
MMRTVFQVLCFFAFFTLACFVVLLYFRNDSTLTQFKQSDDKVKVNMKVPQWTKEPKNGSL
NLTKETTVMAPTPRKGLEPCPDTPPHLVGPLFVEFNSKRSLDEIRKDMDPVLKEGGRYKP
PDCIALQKVAIILAFRNRHEHLKHWLFYLHPILIRQQLDYTVYVINQDGEGVFNRAKLLN
AGYVEALKEYDYDCFVFSDIDLIPIDDRNLYRCFENPRHLAVAMDKFNFRLPYNTYFGGV
SSLSKTQYLKINGFPNTYWGWGGEDDDIYKRIAYRGMSISRPDSVLGKYRMIKHERDLHN
EVNPKNPDKLSHTRRDMDTDGLNTLKYTVKEIVKDILYTFITVDIDAPPS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaacagtctttcaagtcctatgcttctttgcttttttcactctggcatgtttt
gtggtgcttctatactttagaaacgacagcactttaactcagtttaaacaatcggacgat
aaagtaaaggtaaacatgaaagttcctcaatggaccaaagaaccaaagaatggatccctt
aatctcaccaaagaaacgacagtgatggcacccactccaaggaagggtttggaaccttgc
cctgacacccccccgcatcttgtgggtcccctctttgtggagtttaatagcaaaagatcc
ttggatgaaatcagaaaggatatggatcccgttctgaaggagggaggacgatacaagcct
ccagactgcatcgccctgcagaaggtggccatcatccttgcattcagaaatcggcatgag
cacctgaagcactggctgttttatctccatcccatactgatacgacagcagttggactac
acagtgtatgttatcaaccaggacggagagggagtgttcaaccgggctaaactgttgaat
gccggctatgtggaagcgctgaaggaatatgattatgattgcttcgtcttctctgacata
gatttgattcccatcgatgaccgtaacctctatagatgttttgaaaatccacgacacttg
gccgtagctatggacaaatttaatttcaggttaccctacaacacctactttggcggggtt
tcttcattgtccaagacgcaatacttgaagatcaatggcttcccaaacacttactggggc
tgggggggtgaggacgatgacatctataagagaattgcctaccgtgggatgtccatctct
cgaccggactctgtgttgggaaagtacaggatgatcaaacatgagagagacttgcacaat
gaggttaatccaaagaatccggataaactgagccacactcgtagagacatggatacagat
gggcttaataccctcaaatacacagtcaaggagattgtgaaggatattctgtacacattt
atcactgtggatattgacgctccgccaagctaa
DBGET
integrated database retrieval system