Pseudochaenichthys georgianus (South Georgia icefish): 117465469
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Entry
117465469 CDS
T09629
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117465469 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
pgeo04050
]
117465469 (tnfrsf11a)
04090 CD molecules [BR:
pgeo04090
]
117465469 (tnfrsf11a)
Cytokine receptors [BR:
pgeo04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117465469 (tnfrsf11a)
CD molecules [BR:
pgeo04090
]
Proteins
117465469 (tnfrsf11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
117465469
NCBI-ProteinID:
XP_033964165
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Position
20:complement(3005248..3019208)
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AA seq
626 aa
AA seq
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MRFNLLILRGWITCLLVTFYAQNGASKSINQCEDERYYLKGSSRCCKKCQPGFHVFSDCT
DSDSTICRTCNSGEYQPGWTDENHCLQQKFCDEHKGFKKRLENSMAEEPCSCRSSLQCSP
INCEFCEKIPTCGAGYGLEVDLESSDEMKTCVPCQKGFFSADNRAEQCKQWTSCNAEGRS
EMQPGSAQADAVCGHPVSAPSWVIVSVLSVITVLCLLVLLLFCYKDKLKLLSVNLRSCVQ
NLKRTRIQQETLAPLYHSVAGGGHKSTPCEMTKLVCQVPHSPANELQCPFPTSVPEVKVS
LPFTGEMTEGKGTKEKTVTEDQSKGSGEPEEVSEDEGIVVASPLLAGLCVCVIPVSEPLE
VGENEDCSQAVNPGTPGTCSCGGLDGDWESGREEKSGDANQEKIVLSPGVASLVSLSPPP
LRTSSDVSPSTPELCLPLSQAQVRPEFKPHLTDRLLVKQEDLYRLKSTDSSLTDTSVSPL
LTSSSVGDLYLDPETSSPEQWGVSRGNKLSSGGSELECSPESLHSQLADPTPTSGQVSGN
NNTTFISSGQVMNFSGEVIVVYVSQTSLGSDGQGNSFGSPVQEEANETALFFQSSLRSQG
DSISQNTWQEETLPVQEVVEERPRGK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagatttaacttattgatactccgaggctggataacatgtctcctggtcaccttttac
gcacagaatggggcctcaaaatctatcaaccagtgtgaagatgaaagatattatttaaaa
ggctcctccagatgctgcaagaagtgtcaaccaggcttccacgtgttttccgactgcact
gattccgacagcactatatgtagaacatgtaacagcggtgaataccagcccggatggacc
gatgagaaccactgtcttcagcagaagttctgcgacgaacataagggtttcaagaagcgg
cttgagaactcgatggcggaagagccgtgcagctgccgctccagcctccagtgcagtccc
atcaactgtgagttctgcgagaagatacccacctgtggcgctgggtatggactggaggtg
gacctcgagtcttctgatgagatgaagacgtgtgttccgtgtcagaaaggcttcttctct
gctgacaacagagccgaacaatgcaaacaatggactagttgtaatgcggagggcaggagt
gagatgcagcccggcagcgcccaggcagatgcagtgtgtgggcaccctgtctctgccccc
tcctgggttatcgtttctgttctgtcagtcatcacggtgctgtgtctcctcgtcctgctc
ctcttctgctacaaggacaaactgaagttactctcagtaaacctgcgatcatgtgtccag
aatctgaagaggactaggattcaacaggagaccttggcccctctttaccacagtgtagca
ggaggaggccacaaatctactccatgtgagatgactaaactcgtctgccaagtgccccac
agccccgccaatgaactccagtgccccttccccacctctgtccccgaggtcaaggtctcc
ctgcccttcacgggggaaatgacggagggaaaagggaccaaggagaagacagtgacggag
gaccagagcaaagggtctggagagcccgaggaggtgtcagaagatgaggggatcgtggtt
gcgtctcctctcctggcgggcttgtgtgtgtgtgtcattcccgtcagcgagccattggaa
gtcggggagaacgaggactgcagtcaggcggtgaaccccgggaccccaggaacctgctcc
tgtggagggctggacggagactgggagagcgggagagaggagaaaagtggggatgcgaat
caagaaaagattgtgttgtcccctggtgttgcatctcttgtctctctttctcctccaccc
ctccgcacctcctctgatgtctctccctccacacctgagctctgcctgccgttgtctcag
gctcaggtgaggccagagttcaaacctcacctcactgacagattgctggtcaaacaggag
gacttatacagactgaaaagtacagactccagtttaacagacacttcggtcagcccattg
ctgacttcctcctctgttggagatctctacctggaccctgagacctccagcccggagcaa
tggggggtcagcaggggaaacaagctctcctcgggggggtcggagctggagtgctcacct
gagagcctccacagtcagctggctgacccaactcctacctcaggtcaggtgtctgggaac
aacaacaccaccttcatctccagcggtcaggtgatgaacttcagcggggaggtcatcgtg
gtgtatgtcagccagacgtctctgggcagcgacgggcagggcaattccttcgggagcccc
gtccaggaagaggccaatgagacggctctgttcttccagagcagcctgaggtcacaagga
gactccatttcccagaacacctggcaggaagagacactgccagtccaggaagtagtggag
gagcggccgcggggaaagtga
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