Pseudochaenichthys georgianus (South Georgia icefish): 117465546
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Entry
117465546 CDS
T09629
Symbol
flt1
Name
(RefSeq) vascular endothelial growth factor receptor 1 isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
pgeo04020
Calcium signaling pathway
pgeo04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117465546 (flt1)
04020 Calcium signaling pathway
117465546 (flt1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117465546 (flt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pgeo01001
]
117465546 (flt1)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117465546 (flt1)
Protein kinases [BR:
pgeo01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
117465546 (flt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_2
ig
VEGFR-1-like_Ig-like
Ig_VEGFR-1-like_5th
V-set
VEGFR1-3_N_Ig-like
VEGFR-2_TMD
Ig_4
C1-set
C2-set_2
Haspin_kinase
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
117465546
NCBI-ProteinID:
XP_033964304
LinkDB
All DBs
Position
20:21748449..21786858
Genome browser
AA seq
1257 aa
AA seq
DB search
MMNLILLCLLCGLYGVLAKDKAQKGKYSVPILDVKTRQLVLDTNQTLLLSCRGRWELAWA
FPSGLLRGEVQVEEFRCGRTGKLFCSRLTVSSTETQHTGLLRCRYRHRTRRQTSIYLYVT
DSQQPFVDHPDMSPDVLYMKDKQPLDIPCRVTHPNITTTLVKYPNLSLSPDHRVILWNSK
KGFTIRTPTFYYIGLFYCQTVTEGVTHVSRKYFIYRPVSNIMDVYLNSSGPVEALKGERL
VLNCTATGELNTRVNITWDYPGKINNTGSTSKRLLKHRTHLLFYNILTIPKLLRSDRGLY
TCRVTSGEKTKEQRVNVTVFDRPFIRLKSRHGAVIKVQAGQKSYRISPKLRAFPEPQVIW
LKDGMVAAEQCSRYHMDGTALVIRDVAEEDAGKYTVLVRILEHGLYQNLTLTLVVNVSPQ
IGEKAVSLQDPGSVPRGSRTALHCTSHGVPPPRIQWLWHPCPSKGLCVCPTSSSLWSPVI
ERVPATSTSNHILSVTHRQEVLQGKNKTVGVLTVAEASVSGGYRCVAFNAAGADQLLIHF
YVTDVPGGFSVSQREEPREGGDLHLTCSANKYLYGALSWQRVNDTGHAQSRSPAPQQLTS
GAFSNSLVLLLSNLTATDSGAYRCSTHHLVTGQNTDLDTQVEVTILEPPVLLDNLTDCTV
NVSSSVFLSCPSAGVPPPTVTWYKDEQALSQGSGIVISPDDGTLNIDRITAEDQGLYTCQ
ATNERGSAESSAYIWVNGASEASFLEIPALTCTCVVATLLWLFLTLVIRKLKQPNSSNTK
PEFLSIILDRGGGPMEEPCERLQYDPSQWEFPRERLKLGKPLGRGAFGKVVQAAAFGIEN
TTSCTTVAVKMLKEGATASDHKALMTELKILNHIGHHLNVVNLLGACTKPEGPLMVIVEY
CCYGNLSTFLKGKREVFVHDRDGEPVCDDNTEHHLDTKCGSNSPLFLEDLISFSFQVVRG
MEFLASRKCIHRDLAARNILLSDNKVVKICDFGLARDIYKDPDYVRKGDARLPLKWMSPE
AIFDKVFTTQSDVWSFGILLWEIFSLGGSPYPGLQIDEEFCHRLKAGTRMRAPEYSTPEI
YSTMLACWEAGPSDRPTFTNLVETLGDLLQARVQQEGKDYIPLGSFTAGDTGRSVTCKEN
PLAVTNLSYMRGMATLQTFEELPCVEPDCLNDEQSDSGMVLPSEELKHVTWKKCTKSEKL
SRLFSFTKCRDHQMPFFRDDISGLRSNEPSILPSDWASDEGSSPPPDYNSAFLYPSL
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccttatcctcctctgcctgctatgtggattgtatggagtgcttgcaaaagac
aaggctcagaaggggaagtacagcgtcccgattctagatgtgaaaacccggcagctggtc
ctcgacaccaaccagacgctactgctcagctgcaggggtcgctgggagctggcgtgggcc
ttcccctcaggtctgcttcgaggcgaggtgcaggtggaggagtttcgctgtgggaggacg
gggaagctgttctgcagccgccttacggtgagcagcaccgagacccagcacaccggcctg
ctccgctgcaggtaccggcaccggacccgcaggcagacctccatctacctttatgtcaca
gacagccagcagccatttgtggaccaccctgatatgagcccagatgtgttgtacatgaag
gacaagcagccgctggacatcccctgcagggtcacacaccccaacatcaccaccacgctg
gtcaagtacccaaacctcagcttgagtccagaccacagggtcattttatggaacagcaag
aaaggcttcaccatccgaacccccaccttctactacatcggcctcttctactgccagacc
gtcaccgagggcgtcacacacgtgtcccgtaaatacttcatatacagaccagtgagtaac
atcatggacgtgtacctgaacagcagtggacctgtggaggctctgaagggggagaggctg
gtgttgaactgcaccgccaccggggagttgaacaccagagtgaacatcacctgggactac
cccggaaagatcaataacaccggctccacctccaaacggctcctgaaacaccgaacgcac
ttgttgttctacaatattctgaccatcccgaagctgctgcgctccgaccgaggcctgtac
acctgccgcgtgaccagcggggagaaaaccaaagagcagagagtcaatgtcacggtcttt
gaccgtccgtttatccgcctgaagtccagacatggagccgtgataaaagtacaggcagga
cagaaatcttacagaatctctcccaaactgcgagcgttccctgaacctcaagtcatctgg
ttgaaggacggcatggtggcagcggagcaatgctccagataccacatggacgggactgct
ctggtgatccgggacgtggcagaggaggatgctgggaaatacactgtcctggtacgaatc
ctggaacatggactctaccaaaatctcaccctcacacttgtggtcaacgtgagtcctcag
ataggggagaaggcggtatcgttgcaggaccccggctcggtgcccagagggagcagaaca
gcactccactgcacgtctcacggagtcccgcctccacgcatccagtggctctggcacccc
tgcccgtcaaaaggcctgtgtgtgtgtcccacgtcctcctcactgtggagtccagtaata
gagagggtccccgccacgtccacaagcaaccacatcctgagtgttacacacagacaggaa
gtgcttcaggggaaaaacaagacggtgggggtcctgactgtggcagaggcctctgtgtct
ggaggatatcgctgcgtcgccttcaacgctgccggagcagatcagctcctcatccacttc
tacgtcacagatgtcccaggaggcttcagtgtgagtcagagggaggagcctagagagggc
ggagacctccatctcacctgttcagccaataagtacctgtatggtgcgttatcatggcaa
cgggtgaatgacacagggcacgcccaatcacgcagccccgccccgcagcagctcacatcc
ggggcgttctccaattcactggtcctgttactaagcaacctaacagccacagactcagga
gcctacagatgctccacccaccacctggtcaccgggcagaacacagacctggacacacag
gtggaggtcacaattttggagcctccagtgctgcttgataatctgacagattgcacagtg
aatgtcagcagctccgtcttcctcagctgtccgtctgcaggcgtccccccgcccaccgtc
acatggtacaaggacgaacaagctctctctcagggatcaggtattgtgatatccccagac
gatgggaccctcaacatcgatcgaatcacagcggaggaccagggtctgtatacgtgccag
gcgaccaatgagagggggtcagcagagagctctgcctatatatgggttaatggtgcctct
gaagcctccttcctggagatcccagctctcacctgtacctgtgtggtggccactctgctc
tggctgtttctgaccctcgtcatacgcaagctgaagcagcccaacagctcaaacaccaaa
ccagagttcctgtcaatcattctggacagaggaggcggaccaatggaggagccgtgtgag
agactgcagtacgaccccagccaatgggagttccctcgagagcggctcaaattagggaag
cctctgggccgcggggccttcgggaaggtggtgcaggcggctgccttcgggatagaaaac
accaccagctgcaccactgtggccgtgaagatgctcaaagagggcgctacagccagcgat
cacaaggctctgatgactgaactgaagatcctcaatcacattggacatcatctgaatgta
gtcaacctcctgggagcatgcaccaagcccgaagggccactgatggtcatcgtcgagtac
tgttgctatggaaatctgtctaccttcctgaagggcaagagagaagtgtttgtgcacgac
cgtgatggagagccagtgtgtgatgacaatacagagcatcacctcgacaccaaatgtggc
tccaactctcctttattcctggaggatctgatctccttcagcttccaggtggtgcggggg
atggagttcctcgcctctcgcaagtgtatccacagagacctggcagccagaaacattttg
ctctctgacaataaagtggtgaagatctgtgacttcggcctggccagagacatctacaaa
gaccccgactacgtccgcaagggagatgcccgcctccctctgaaatggatgtctccagaa
gccatctttgacaaggtgttcaccacgcagagtgacgtgtggtccttcggcatcctgctg
tgggagatcttctctctgggaggttctccgtaccctggtcttcagatcgatgaagagttc
tgccacagactgaaggcgggaacaaggatgcgagcgcctgaatacagcacacctgagatc
tacagcacaatgctggcctgttgggaggccggaccctcagaccgacccaccttcactaac
ctggtggagaccctgggagacctgctgcaagcgcgcgttcagcaggaaggcaaggattac
attcctctggggtcttttacggctggagatactggtcgcagcgtgacatgcaaagaaaac
ccgcttgcagtcacaaacctgagttacatgaggggtatggccacacttcagacgtttgag
gaacttccctgcgtggagccagactgcctgaatgacgagcagagtgacagcggcatggtc
ctgccgtccgaagagctgaagcacgtgacgtggaaaaaatgcaccaagagcgagaaactg
agcaggcttttttctttcactaagtgccgggaccaccagatgcctttcttccgcgatgac
atcagcggtctccgtagcaacgagccgtccatcctgccgtctgattgggcgtctgacgag
ggcagctcccctcctccagactacaactctgcttttctgtacccctccctctag
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