Pseudochaenichthys georgianus (South Georgia icefish): 117466070
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Entry
117466070 CDS
T09629
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117466070 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pgeo04052
]
117466070 (bdnf)
Cytokines and neuropeptides [BR:
pgeo04052
]
Cytokines
Growth factors (RTK binding)
117466070 (bdnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
117466070
NCBI-ProteinID:
XP_033965092
LinkDB
All DBs
Position
3:complement(33179519..33194388)
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AA seq
277 aa
AA seq
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MFHQVRRVMTILFLTMVISYFSCMRAAPLRDVPGMRGHRTEGYLGAAATAVRGHGTPQSD
GGPGQRGELPSLTDTFEQVIEELLEVEGEAAKLAQGPDKSQGGGGPSSMVTTETKDVDLY
DSRVMISNQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPSRRGELSVCDSISQWVTA
VDKKTAIDMSGQTVTVMEKVPVPNGQLKQYFYETKCNPMGYTKEGCRGIDKRHYNSQCRT
TQSYVRALTMDSKKKIGWRFIRIDTSCVCTLTIKRGR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgttccaccaggttagaagagtgatgaccatcctgttccttactatggttatttcatac
ttcagttgcatgagagctgcgcccctgagagacgtcccgggcatgcggggccatcggacg
gagggctacttgggcgctgctgcgacggccgtacgaggccatgggactcctcagagtgat
ggggggccgggccagcgcggggaactgccctcactcacagacacgtttgagcaggtgata
gaggagctgctggaagtggagggagaggcggcaaagctggcacaggggcctgataagagc
cagggaggagggggcccgtcctccatggtcaccacagagaccaaggatgtcgacctgtac
gactcgcgggtgatgatcagcaaccaagtgcctttggagccgccgttgctctttcttctg
gaggaatacaaaaactatctggatgccgctaatatgtccatgagggtgcggcgacactcc
gatccctcacggcgcggagagctcagtgtatgtgacagtattagccagtgggtgacagct
gtggataaaaagacggcaatagacatgtctgggcagacagttaccgtcatggaaaaggtc
cctgtccccaatggccaactgaagcaatacttttatgagaccaaatgcaaccccatgggg
tacacaaaggagggatgcagaggaatagacaagcggcattataattcccaatgcaggaca
acccagtcctacgtgcgagcgcttaccatggatagcaaaaagaagattggctggcggttt
ataaggatagacacttcatgtgtatgcacattgaccattaaaagagggagatag
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