Pseudochaenichthys georgianus (South Georgia icefish): 117467610
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Entry
117467610 CDS
T09629
Symbol
babam2
Name
(RefSeq) BRISC and BRCA1-A complex member 2 isoform X1
KO
K12173
BRCA1-A complex subunit BRE
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117467610 (babam2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117467610 (babam2)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117467610 (babam2)
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117467610 (babam2)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
117467610 (babam2)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
117467610 (babam2)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
117467610 (babam2)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
117467610 (babam2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
117467610
NCBI-ProteinID:
XP_033967233
LinkDB
All DBs
Position
22:complement(22985543..23095530)
Genome browser
AA seq
396 aa
AA seq
DB search
MSDSSLRADTMNDISPEVALHRISPELRPLLCSVVRNGRVGLDSTNCLRVTDLKTGCISL
TPGPCCDRFKLHIPYAGETLKWDIIFNAQFPELPPDFIFGEDAEFLPEPSELPHLVQWDA
GNPECLLQLVKELIQQYHHYQCQRLRESSRLLFEYDSLLEDPNYGRNMEIYAGRKNSWTG
EFSARFLLKLPVDFSNIPVYLLKDTALDPGEDVALLSVSFEDAEATQVFPKLYLSPSIEH
ALGGSSALHIPAFPSGGCLIDYVPQVCQLLNNKVQYIIQGYHKRREYIAAFLSHFGMGVV
EYDAVGFTKLTLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSVYHFTNSGQLYSQVQKSY
PYSPRWDGNEMAKRAKAYFKSFIPQFQEGAFANGKL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactcatcactcagagcggatacaatgaacgacatctcccctgaggtggccctt
cacaggatctcccctgagctgcggcccttgctgtgcagcgttgtgaggaacggccgcgtg
ggactggactccacgaactgcctccgagtcacagacctcaaaactggatgtatatctctg
acccccggtccctgctgtgatcgcttcaaacttcacatcccctacgctggagaaacgctt
aaatgggacattatattcaatgcacagtttccagaattgcctccagattttattttcgga
gaagatgctgagtttcttccggagccttcagaactgccacacttggtccaatgggatgct
gggaacccagagtgtttgctccagctggtgaaggagctaatccagcagtaccatcactat
caatgccaacgtctacgtgaaagctcccggctactctttgagtacgatagtctgctggaa
gatcccaactatggccgcaacatggagatttatgccggacgcaagaacagctggacggga
gagttttcagcccgtttccttctcaagctgcctgtggacttcagcaacatccctgtctat
ctccttaaggacacagcgttggaccctggagaggatgtggcccttctctcggtgagcttc
gaggatgctgaggctacacaagtcttccctaaactctacctttcccccagcatcgaacat
gctctgggaggatcctcagcactccatatcccagcattccccagtggaggatgcctaatt
gactacgtccctcaagtgtgccagttactcaacaacaaggtgcagtatatcatccagggc
tatcacaagcggagagagtacatcgctgccttcctcagccactttggaatgggcgtcgtc
gagtatgatgcagtgggattcacaaaactgacccttctactaatgtggaaggacttttgc
ttccttgtacatgtggatctcccactgtacttccccagggaccagcccaccctcaccttc
cagtctgtgtaccacttcaccaacagcggacagctctattctcaggtgcagaagtcatat
ccctacagccctcgctgggatggcaatgaaatggcaaagagggccaaggcgtacttcaag
agcttcatccctcagttccaagagggagcctttgccaacgggaaactctag
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