Pseudomonas germanica: J0G10_24695
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Entry
J0G10_24695 CDS
T08191
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pgf
Pseudomonas germanica
Pathway
pgf01501
beta-Lactam resistance
pgf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J0G10_24695
01503 Cationic antimicrobial peptide (CAMP) resistance
J0G10_24695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgf03036
]
J0G10_24695
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgf02000
]
J0G10_24695
01504 Antimicrobial resistance genes [BR:
pgf01504
]
J0G10_24695
Chromosome and associated proteins [BR:
pgf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
J0G10_24695
Transporters [BR:
pgf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
J0G10_24695
Antimicrobial resistance genes [BR:
pgf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
J0G10_24695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
Beta-barrel_RND
HH_MFP_RND
BSH_CzcB
YknX_C
Biotin_lipoyl
RND-MFP_C
BSH_YknX
BSH_CusB
BSH_LcnD
Beta-barrel_YknX
HH_EMRA
CzcB_C
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
QYY80881
UniProt:
A0ABX8YNU0
LinkDB
All DBs
Position
5578303..5579451
Genome browser
AA seq
382 aa
AA seq
DB search
MLRRRMLIMLGVVLLIVLVLGGYKAFSIYTMIQGFSKPKPPISVAVANATEQPWQMRLPT
VGTLKALQGVELSLEVAGTVTELKFESGQKVKAGQPLLQLDSGVETALLETAKADLGLAQ
LDFGRGAQLVDSRAISKGEYDRLSAVLQKNKATVNQLNASLAKKRILAPFSGTIGIRQVD
VGDYLASGTKIATLQDLSSLYADFYLPEQSVPKLAIGQPVQIAVAAYPKQNFAGKISAIN
PIVESTTRNILVRATLANPDGKLLPGMFASLEVLLPDPQKHIVVPESAITYTLYGNSIYV
VGQKKAEDGSLEKDDKGQPVLIAERRFIETGERRDGLVMINKGVQSGEQVVTAGQIKLDN
GAHIAISDDKTLGEQNSPPRAD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtcgccgcatgctgatcatgttgggtgttgttttgttgatcgtcctggtgctg
ggcggatacaaagccttttcgatctacacaatgatccagggcttttccaagccgaaaccg
ccgatcagcgttgccgtggccaatgccaccgaacagccgtggcagatgcgtctgccgacc
gtcggcacgctcaaggcgctgcaaggtgtcgagctgagcctggaagtcgccggcaccgtc
accgaactcaagttcgagtccggacagaaggtcaaggccgggcaacccttgctgcaactc
gacagtggcgtcgaaaccgccctgctggaaaccgccaaggctgatctcggtctggcgcaa
ctggacttcggccgtggcgcgcaactggtcgacagccgcgcaatctccaaaggcgagtac
gaccggctctccgctgtactgcaaaaaaacaaagccacggtcaatcagctcaacgcttcg
ctggcgaaaaaacgcatcctcgcaccgttcagcggcaccatcggcatccgtcaggtcgac
gtcggcgactacctcgccagcggcaccaaaatcgccacgctgcaggacttgagcagcctc
tacgccgacttctacctgcccgaacaatcggtgccgaaactggccatcggtcagccggtg
cagattgcagtcgccgcctatcccaagcaaaacttcgccggcaagatcagcgcgatcaac
ccgatcgtcgaaagcactacgcgcaacattctggttcgcgccacgctggccaaccccgac
ggcaaattgctgccgggcatgttcgccagcctcgaggtgttgttgccggatccgcagaaa
cacattgtcgtgccggagagcgcgatcacctacaccctctacggcaactcgatctacgtg
gtcgggcaaaagaaagccgaagacggcagtctcgaaaaggacgacaagggccaaccggtg
ctgatcgccgaacgccgcttcatcgaaaccggtgaacgccgcgatggcctggtgatgatc
aacaagggcgtgcagagcggcgaacaagtggtaacggctggccagatcaaactggacaac
ggcgcccacattgccatcagcgacgacaagaccctcggcgagcagaacagtccgccgcgc
gccgactga
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