Pseudomonas graminis: FX982_00576
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Entry
FX982_00576 CDS
T06934
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pgg
Pseudomonas graminis
Pathway
pgg00300
Lysine biosynthesis
pgg00550
Peptidoglycan biosynthesis
pgg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FX982_00576
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FX982_00576
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgg01011
]
FX982_00576
Enzymes [BR:
pgg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FX982_00576
Peptidoglycan biosynthesis and degradation proteins [BR:
pgg01011
]
Precursor biosynthesis
Amino acid ligase
FX982_00576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QKF49656
UniProt:
A0A6M8MCT9
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All DBs
Position
complement(628224..629687)
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AA seq
487 aa
AA seq
DB search
MSLNLSKLFAQCNRDLLIRELTLDSRKVRPGDLFLAIPGLKIDGREHITDAIAHGAAAIA
YEAEGAKVLPITDIPMIPVKGLAAQLSDIAGRFYGDPSRNLNLIGVTGTNGKTSVTQLVA
QALDTLGQHCGIIGTLGTGFYSELKSGIHTTPDPISVQSTLYDLKRAGAKAVAMEVSSHG
LDQGRVTALAFDVAVMTNLSRDHLDYHGTMEAYAAAKAKLFAWSDLRCRVVNLDDAFGRQ
LAAAPHPSRLVTYSLEDSSAYLFCRDAHFDDDGVRATLVTPQGSHALRSSLLGRFNLSNV
LAAVGALMGLDYPLDDILKVLPTLEGPAGRMQRLGGGSRPLVVVDYAHTPDALEKVLAAL
RPHAKGQLTCLFGCGGDRDRGKRPLMAEVVERLADKVLVTDDNPRSEDPSRIFDDIRTGF
VSANAVDFVAGRGQAIAQIVAQASAADVIVLAGKGHEDYQEINGERQPFSDLEEATKALD
AWEAAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgaatttgagcaagctgtttgcgcagtgcaatcgcgatctgctgattcgcgaa
ctgaccctcgacagccgcaaagtgcgtccgggcgatttgtttctggcgattccgggcctc
aagatcgacggccgcgagcacatcactgacgccatcgcccatggcgcggccgccatcgct
tacgaagccgaaggcgccaaggtgctgccgatcaccgacattccgatgattccggtcaaa
ggcctggcagcacagctgtccgacatcgccgggcgcttctatggcgaccctagccgcaac
ctgaacctgatcggcgtgaccggcacaaacggcaaaaccagcgtgactcagttggtggcg
caggcgttggacacgcttggacagcactgcggcatcatcggtacgctgggcaccggcttc
tatagcgagctgaaaagcggcattcacaccacgccggatccgatctccgtgcagtcgacc
ctgtatgacctgaaaagggccggggccaaagcggttgccatggaagtctcgtcccacggg
ctggatcagggtcgggtgaccgcgctggctttcgacgtggcggtgatgaccaatctgtcc
cgtgaccatctcgattaccacggcaccatggaggcgtacgcggccgccaaggccaagttg
ttcgcctggagtgacctgcgctgccgtgtggtcaatcttgacgacgcatttggtcgacag
ctcgctgcggcgcctcacccttcgcgcctggtgacttacagcctggaagacagcagtgct
tatctgttctgccgtgacgcgcatttcgatgacgacggcgtgcgcgcgaccctggtaacg
ccccagggcagccatgcgttgcgcagcagcctgctgggccgtttcaacctgagtaatgtg
ctggctgcggtcggcgcgttgatgggccttgattatccgctcgacgacatcttgaaagta
ctgccgacgctggaaggccctgctggccggatgcagcgtctgggcggtggttcacgtccg
ctggtggtggtcgattacgcccacacccctgacgcgctggaaaaagtgctcgcggcgttg
cgtccccatgcaaaaggtcaactgacctgcctgttcggctgcggcggcgatcgcgatcgc
ggcaagcgcccgctgatggcggaagtggtcgagcgtctggccgacaaagtgctggtcacc
gacgacaacccgcgcagcgaagacccgtcccgtattttcgatgacatccgtaccggattc
gtctcggctaacgcagtggatttcgttgccgggcgtggtcaggccatcgcgcaaatcgtt
gcacaggcgtccgccgccgatgtgatcgtgctggccggcaagggccacgaggattaccag
gaaatcaacggagagcgtcagccgttttccgatcttgaagaagccaccaaagcgctcgac
gcctgggaggctgcacatgcttaa
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