Pseudomonas graminis: FX982_04730 Help Entry FX982_04730       CDS       T06934                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pgg  Pseudomonas graminis Pathway pgg03030   DNA replication pgg03410   Base excision repair pgg03420   Nucleotide excision repair pgg03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pgg00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     FX982_04730    03410 Base excision repair     FX982_04730    03420 Nucleotide excision repair     FX982_04730    03430 Mismatch repair     FX982_04730  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pgg03032]     FX982_04730    03400 DNA repair and recombination proteins [BR:pgg03400]     FX982_04730 Enzymes [BR:pgg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      FX982_04730 DNA replication proteins [BR:pgg03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      FX982_04730 DNA repair and recombination proteins [BR:pgg03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      FX982_04730    NER (nucleotide excision repair)     GGR (global genome repair) factors      FX982_04730    MMR (mismatch excision repair)     DNA ligase      FX982_04730   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       FX982_04730 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT Nlig-Ia DNA_ligase_ZBD PTCB-BRCT Tla3_C DUF4796_N Motif Other DBs NCBI-ProteinID:  QKF53737 UniProt:  A0A6M8N2T4 LinkDB All DBs Position complement(5314463..5316811) Genome browser AA seq 782 aa AA seqDB search MKAAETRILELRAELDQHNYRYHVLDEPSIPDVEYDRLFHELKALEVENPHLVTPDSPTQ RVGSAALSAFTQVRHEIPMLSLGNAFEETDMLEFDRRVNEGLDLPAASKKVEYSCEPKLD GLAVSLLYQNGALVRGATRGDGTTGEDISVNVRTVRNIPLKLHGKGWPDTLEVRGEVFMS KAGFERLNASQLEVGGKTFANPRNAAAGSLRQLDSKITANRPLEFCCYGIGQVSHDIADT HTGNLQQLKEWGMPISREMKIAHGIEDCLKYYHDIGEKRLSLPYEIDGVVFKVNSIAAQR ELGFRAREPRWAIAHKFPAMEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTVANATL HNMDEVARLGLMIGDTVIIRRAGDVIPQVVQVVQERRPTDARAVEIPQTCPVCGSLVERT QLIKRSKGKETISEGAVYRCVGRLACGAQLKQAIIHYVSRRAMDIEGLGDKTIEQLVDEK LIGSPADLYKLTYEQIIDLEGFADISSKKLLKAIDDSKQPTLARFIYALGIPDVGEETAK VLARSLGSLDRVIVALPEVLTYLPDVGLEVAHEIHSFFEDEHNQNVIGALLGECQLQLQD TGDLGAEFAASATLGGLLDKLNIPSVGPGAAQKLADKFGILEAVVKADWLDMRQTLPEKQ AQAVRAFFDVPEHAQRALAIEQQLRDFGMHWQSEKKVVEGLPLAGQTWVLTGSLELMSRD VAKEKLEGLGAKVSGSVSAKTRTVVAGPGAGSKLTKANELGLKVLDEEAFVAFLKQQGVE VG NT seq 2349 nt NT seq  +upstreamnt  +downstreamnt atgaaagccgccgaaacccgcatccttgaactgcgcgctgagctggatcagcacaactac cgctatcacgtcctcgacgagccaagcatcccggacgtcgagtacgaccggctgttccac gagctgaaggcgctggaggtagagaacccgcatctggtaaccccggactcgccgacccag cgggtgggcagtgcggcgctgtcggcgttcacccaggtgcgccacgaaatccccatgctc agccttggcaacgccttcgaagaaaccgacatgctcgagtttgatcgtcgggtcaacgaa ggcctggacctgccggctgcttcgaagaaagtggaatacagctgcgagccgaaactcgac ggcctggcggtcagcctgctttaccagaacggcgccctggttcgcggcgccacccgcggc gacggcaccaccggcgaagacatcagcgtcaacgtgcgcaccgtgcgcaacatcccgctg aagctgcacggcaaaggctggccggacaccctcgaagtgcgcggcgaagtgttcatgtcc aaggccggcttcgagcgtctgaacgccagccagcttgaagtgggtggcaagaccttcgcc aacccgcgcaacgcggcggccggcagcctgcgccagctggattcgaaaatcaccgccaac cgcccgctggaattctgctgctatggcatcggtcaggtgtcccatgacatcgccgacacc cacaccggcaacctgcagcagttgaaagagtggggcatgccgatcagccgcgagatgaag atcgcccacggcatcgaagactgcctgaagtactaccacgacatcggcgagaaacgtctg tcgttgccgtacgaaatcgacggcgtggtgttcaaggtgaacagcatcgccgcccagcgt gagctgggtttccgcgcccgcgagccgcgctgggcgatcgcccacaaattcccggccatg gaagaactcaccgagctgctcgacgtggaattccaggtcggccgcaccggcgccgtcacc ccggtggcacgtttgaaaccggtaaaagtcgccggtgtcaccgtcgccaacgcaacgctg cataacatggacgaagtggcgcgtctgggcttgatgatcggcgacaccgtgatcatccgc cgcgcgggcgacgtgattccccaggtggtgcaggtcgtgcaagagcgccgcccgacagac gcccgcgccgtcgagatcccgcagacctgcccggtgtgcggctccctggtcgagcgcacg cagctgatcaagcgcagcaagggcaaggaaaccatcagcgaaggcgcggtgtatcgctgc gtcggccggctggcctgcggcgcgcagctgaaacaggcgatcatccattacgtctcgcgg cgggcgatggacatcgaaggcttaggcgacaaaaccatcgagcaactggtggacgagaag ctcatcggctcgccggccgatctgtacaagctgacgtacgagcagatcatcgatctggag ggttttgccgacatctccagcaagaagctgctcaaggccatcgacgacagcaagcagccg acgctggcgcggttcatctatgcgctgggtattccggacgtgggcgaggaaacggcgaag gtgttggcgcgctcgttgggttcgctggaccgggtgattgtggcgctgccggaggtgctg acgtatctgccggacgtgggtctggaagtggcccatgagattcacagtttcttcgaggac gagcacaaccagaacgtgatcggcgccttgctcggcgaatgccagctgcagctgcaggac acgggcgatctgggcgcggagttcgcggcgagcgcgaccttgggcggcctgctggataag ttgaatattccgtcggtggggccgggtgcggcgcagaagctggcggacaagttcggcatc cttgaggcggtcgtcaaggcggactggctggatatgcggcagaccctgccggagaagcag gcgcaggcggtgcgggcgtttttcgatgtcccggagcacgcgcagcgggccttggcgatc gagcagcagctgagggatttcggcatgcactggcagagcgagaagaaggtggtagagggg ttgccgctggccgggcagacgtgggtcctgaccgggtcgcttgagctgatgagccgggat gtggcgaaggagaagctggaggggctgggtgcgaaggtgtccggttcggtgtcggcgaag acccgcacggtggtggctgggccgggggcgggctcgaagttgaccaaggccaatgagctg gggctgaaggtgctcgacgaagaggcgtttgtggcgttcctgaagcaacaaggcgtcgaa gtgggctga

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