Photobacterium ganghwense: FH974_10575
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Entry
FH974_10575 CDS
T07175
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FH974_10575 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgh03400
]
FH974_10575 (nth)
Enzymes [BR:
pgh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FH974_10575 (nth)
DNA repair and recombination proteins [BR:
pgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FH974_10575 (nth)
Prokaryotic type
FH974_10575 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QSV13190
LinkDB
All DBs
Position
1:2333882..2334523
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AA seq
213 aa
AA seq
DB search
MNNEKRVQILERLRAANPHPETELNWSSPFELLIAVLLSAQATDVSVNKATDKLYKVANT
PQTMLDLGVDGVKEHIKTIGLFNSKAENVIKTCKILVEQHGGEVPEDREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTKFAMGKNVDQVEQKLLKVVPKEFKVDVHHWLI
LHGRYTCVARKPRCGSCIIEDLCEYKDKVYPEE
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgaaaagcgtgtccagattctggaacgcctgcgagcagcaaaccctcatccg
gaaacggagctgaactggagctccccctttgaactactgatcgctgtcctcctctctgct
caggctaccgatgtcagtgttaacaaggcgacagacaaactttacaaagtagccaataca
ccacaaaccatgctggatctgggtgtcgatggggtgaaagagcacatcaaaactatcggt
ttgttcaattccaaggccgaaaacgtcatcaagacctgtaaaattctggttgaacagcat
ggcggtgaagtaccggaagatcgtgaggcgctggaagcattacccggtgtcgggcgtaaa
acggcgaatgtggtcctgaatacagccttcggctggccgaccatcgcggtcgatacgcat
attttccgggtatccaatcgcaccaagtttgcaatgggtaagaatgtcgatcaggtcgag
cagaagctactgaaagtggtaccgaaggaatttaaagtggatgttcaccactggctgatc
ctacacggacgctatacctgtgtcgcgcgaaaaccacgttgcggcagctgtattattgaa
gacctctgcgagtacaaagacaaggtctacccggaagaataa
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