Pteropus vampyrus (Indian flying fox): 120589234
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Entry
120589234 CDS
T07511
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pgig
Pteropus vampyrus (Indian flying fox)
Pathway
pgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120589234 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgig03041
]
120589234 (EFTUD2)
Spliceosome [BR:
pgig03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
120589234 (EFTUD2)
Complex C
U5 SnRNP specific factors
120589234 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
120589234
NCBI-ProteinID:
XP_039702680
UniProt:
A0A6P6BQB1
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDEDDDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLSVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKSKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgagtttgggaattatattggcccagagctagattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgacgagatggatgaggatgac
gatgacgatgatgtaggtgatcatgatgaagatcaccctggaatggaggtggtgctgcat
gaggataagaaatactatcccaccgctgaagaagtgtatggtcctgaagtggagaccata
gttcaggaggaagacacccagcctctcacagaacccatcattaaaccagtgaaaaccaag
aaattcactctgatggagcaaacattacctgtcacagtgtatgaaatggacttcttggca
gatctgatggataactcggagctcatcagaaatgtgaccctttgtggccaccttcatcac
ggcaagacgtgttttgtagattgtttaatagagcagactcacccggaaatcagaaagcgc
tatgaccaagatctgtgctacactgacatcctcttcacagagcaagagagaggtgttggc
atcaaaagcactcctgtgacagtggttttgccagataccaagggaaaatcttacctcttc
aatatcatggacactccaggacatgtgaatttttctgatgaggtcacagctggcttgcgt
atctcagatggagtggtccttttcatcgatgctgctgagggcgtgatgctgaacacagag
cggctgatcaagcacgcggtgcaggagaggctctcggtcactgtgtgcatcaacaaaatc
gaccggctgatcctggagctgaagctgcctccaaccgatgcttattacaagctgcgccac
atcgtcgatgaggtcaacgggttgataagcatgtattccactgatgagaacttgatcctg
tccccactcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacactg
ggttcctttgccaagatctatgctgacacctttggtgacattaactaccaggaatttgct
aaaagactctggggtgacatctacttcaaccccaagacgcgaaagttcacaaaaaaggcc
ccaactagcagctcccagaggagcttcgtggagtttatcttggagcctctttataaaatc
ctcgctcaggttgttggtgatgtggacaccagcctcccgaggaccctagatgagcttggc
atccacctgaccaaagaggagctgaagctgaacatccgtcccctgctcaggctggtctgt
aaaaagttctttggcgagttcacaggctttgtggacatgtgtgtacagcatatcccctct
ccaaaggtgggtgccaagtccaagattgagcacacctacaccggcggtgtggactccgac
ctcggtgaagccatgagcgactgtgaccccgatggtcccctgatgtgccatactaccaag
atgtacagcacagatgatggagttcaatttcatgcctttggtcgagtgctaagtggcacc
atccatgctgggcagcctgtgaaagtgctgggtgagaactacaccctggaggacgaggaa
gactcccagatatgcactgtgggccgcctttggatctccgtggccaggtaccacattgag
gtgaaccgtgttcctgctggcaactgggttctgattgaaggtgtcgatcagccaatcgtg
aagacagcgaccataaccgaacctcgaggcaatgaggaggctcagattttccggcccttg
aaattcaacaccacatctgttatcaagattgcggtggagccagtcaacccctcagagctg
cccaagatgctggacggtctgcgcaaggtcaacaagagctatccatccctcaccaccaag
gtggaagaatctggcgagcacgtgattctgggtactggggagctctacctggactgtgtg
atgcacgatttgcggaagatgtactcagaaatagacatcaaggtggctgaccccgttgtc
accttttgtgagacagtggtggaaacgtcttccctcaaatgctttgctgaaacacccaat
aagaagaacaagatcaccatgattgctgagcctctcgagaagggactcgctgaggacatc
gagaacgaggtggtacagatcacatggaacaggaagaagctgggagagttcttccagacc
aaatacgattgggatctgctggctgctcgttccatctgggcttttggccctgatgccact
ggccccaacatcctggtggatgatactctgccctctgaggtggacaaggctcttcttggc
tcagtgaaggacagcatcgttcaaggtttccagtggggaaccagggagggacccctctgt
gatgaattgattcgaaacgtcaagtttaagatcctagatgcagtggttgcccaggagccc
ctgcaccggggcggcggccaaatcatccccacggccaggagagtcgtctattctgccttc
ctcatggccactcctcgtctgatggaaccttactactttgtagaggtccaggcccctgca
gattgtgtctctgctgtttatactgtcctggccaggcgcagggggcacgtgactcaggac
gcacccatcccaggctcccctctctacaccatcaaagctttcatccctgccattgattct
tttggctttgagactgatctgcggactcacacccaggggcaggccttttccttgtctgtc
tttcaccattggcagatcgttcctggtgatcctctggataagagcattgtcatccgcccc
ttggagccacagccagctcctcacttggcccgggaattcatgatcaaaacccgtcgtagg
aagggcctaagtgaggacgtgagcatcagcaagttcttcgatgatcctatgttgctggag
ctcgccaagcaggatgttgtgctcaattaccccatgtga
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