KEGG   Pteropus vampyrus (Indian flying fox): 120592788
Entry
120592788         CDS       T07511                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA dC->dU-editing enzyme APOBEC-3A-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
pgig  Pteropus vampyrus (Indian flying fox)
Pathway
pgig03250  Viral life cycle - HIV-1
pgig05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:pgig00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120592788
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    120592788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgig03019]
    120592788
Messenger RNA biogenesis [BR:pgig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120592788
SSDB
Motif
Pfam: APOBEC2 NAD2 APOBEC_N NAD1 SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 Hydrolase dCMP_cyt_deam_1 Ribosomal_S11
Other DBs
NCBI-GeneID: 120592788
NCBI-ProteinID: XP_039706402
LinkDB
Position
Unknown
AA seq 230 aa
MEAGPAPEARPLMDEQTFLDNFSHLNYLHETYLCYEVESMKDDFWIPLDEYKGFLRNKGA
DMGFQPCHAELIXLELMASWNLDTELRYRITVFISWSPCPDCADELTKFLRANRHVNLRI
FTARICEPFPGYDAVLRALKAAGVKVAMMTFHEFEYCWKNFVDHQQHKDKAFPPWDNLGV
RSEELSQRLAGILQVRVPPSLLPPCLLPPPLLSLSLSFPLLRASSGSPAP
NT seq 689 nt   +upstreamnt  +downstreamnt
atggaggccggcccagcacccgaggccagacccctgatggatgaacagaccttccttgat
aacttcagtcatctgaattacctgcacgagacctacctgtgctatgaggtggagagcatg
aaggacgacttctggatcccactggatgaatacaagggcttcctgcgcaacaagggtgct
gacatgggctttcaaccctgccacgcagagctgatcntcctggagctgatggcttcttgg
aatctggacacggagctgcgctacaggatcactgttttcatctcctggagcccctgccca
gactgtgccgatgagctgactaaattcctgagagcgaacagacacgtgaacctgcgcatc
ttcactgcccgcatctgtgagccattcccaggatatgacgccgtgctgcgcgcactgaag
gcagcgggggtcaaagtcgccatgatgaccttccacgagtttgagtactgctggaaaaat
tttgtggaccaccaacagcataaggataaagccttcccgccctgggataacctgggtgta
aggagtgaagaactatctcagaggctggcgggcattctccaggtgagggttcctccctcc
ctgctgcccccctgcctcctcccacctccccttctctccctgagcctttccttccctttg
ctcagagcctcctctgggtcacctgctcc

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