Pteropus vampyrus (Indian flying fox): 120606104 Help Entry 120606104         CDS       T07511                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism pgig  Pteropus vampyrus (Indian flying fox) Pathway pgig04010   MAPK signaling pathway pgig04064   NF-kappa B signaling pathway pgig04120   Ubiquitin mediated proteolysis pgig04140   Autophagy - animal pgig04144   Endocytosis pgig04380   Osteoclast differentiation pgig04517   IgSF CAM signaling pgig04620   Toll-like receptor signaling pathway pgig04621   NOD-like receptor signaling pathway pgig04622   RIG-I-like receptor signaling pathway pgig04657   IL-17 signaling pathway pgig04722   Neurotrophin signaling pathway pgig04936   Alcoholic liver disease pgig05132   Salmonella infection pgig05133   Pertussis pgig05135   Yersinia infection pgig05140   Leishmaniasis pgig05142   Chagas disease pgig05145   Toxoplasmosis pgig05152   Tuberculosis pgig05160   Hepatitis C pgig05161   Hepatitis B pgig05162   Measles pgig05168   Herpes simplex virus 1 infection pgig05169   Epstein-Barr virus infection pgig05170   Human immunodeficiency virus 1 infection pgig05171   Coronavirus disease - COVID-19 pgig05200   Pathways in cancer pgig05222   Small cell lung cancer pgig05235   PD-L1 expression and PD-1 checkpoint pathway in cancer pgig05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:pgig00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     120606104 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     120606104 (TRAF6)    04064 NF-kappa B signaling pathway     120606104 (TRAF6)   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     120606104 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     120606104 (TRAF6)    04140 Autophagy - animal     120606104 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     120606104 (TRAF6)    04621 NOD-like receptor signaling pathway     120606104 (TRAF6)    04622 RIG-I-like receptor signaling pathway     120606104 (TRAF6)    04657 IL-17 signaling pathway     120606104 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     120606104 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     120606104 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     120606104 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     120606104 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     120606104 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     120606104 (TRAF6)    05161 Hepatitis B     120606104 (TRAF6)    05160 Hepatitis C     120606104 (TRAF6)    05171 Coronavirus disease - COVID-19     120606104 (TRAF6)    05162 Measles     120606104 (TRAF6)    05168 Herpes simplex virus 1 infection     120606104 (TRAF6)    05169 Epstein-Barr virus infection     120606104 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     120606104 (TRAF6)    05135 Yersinia infection     120606104 (TRAF6)    05133 Pertussis     120606104 (TRAF6)    05152 Tuberculosis     120606104 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     120606104 (TRAF6)    05140 Leishmaniasis     120606104 (TRAF6)    05142 Chagas disease     120606104 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     120606104 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     120606104 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pgig04131]     120606104 (TRAF6)    04121 Ubiquitin system [BR:pgig04121]     120606104 (TRAF6) Enzymes [BR:pgig01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      120606104 (TRAF6) Membrane trafficking [BR:pgig04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     120606104 (TRAF6) Ubiquitin system [BR:pgig04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     120606104 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 zf-TRAF_2 SlyX TRAF3_RING RING_XB3-XBAT31 zf-RING_11 PUMA_CC DUF16 U-box Spc29 DUF3450 DUF4140 Myosin_tail_1 EzrA DUF7310 DUF4455 Motif Other DBs NCBI-GeneID:  120606104 NCBI-ProteinID:  XP_039723169 LinkDB All DBs Position Unknown AA seq 540 aa AA seqDB search MSLLNCENSCASSQSESDCCAAMASSCSAATKDDSVSGTASTGNLSSSLMEEIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLETQLFPD NFAKREILSLTVKCPNKGCLHKMELRHLEDHQAHCEFALTNCPQCQRPYQKCHLNIHILK ECPRRQVSCLNCAVSMAFEDKEIHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPI PCTFSTFGCHEKMQRIHLARHLQENTQSHMRMLAQAVQSLNLALAPVPQRDMLPYDSASL PRVSGCHPEVPNFQETIQQLEGRLVIQDHQIRELTAKMETQSMYVSELKRTIRTLEDKVA EIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQR CANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPIRQNHEEIMDAKPELLAFQRP TIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDAGV NT seq 1623 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctaaactgtgaaaacagctgtgcatccagccagtctgaaagtgactgctgc gctgccatggccagctcctgcagtgctgcaacaaaagatgacagtgtgagtggaactgcc agcacagggaatctctctagctctttaatggaagagatccagggatatgatgtggaattt gacccacccctggaaagcaagtatgaatgccccatctgcttgatggcactacgagaagca gtgcaaacaccttgcggccacaggttctgcaaagcctgcatcatcaaatcaatcagggat gcaggtcacaaatgtccagttgacaatgaaatactgctggaaacgcaactgtttcctgac aattttgcaaaacgagagattctttctctgacggtgaagtgtccaaataaaggttgtttg cacaagatggaactgaggcatcttgaggatcatcaagcacattgtgagtttgctcttacg aattgtccccaatgccaacgtccctaccaaaaatgccatcttaatattcacattctcaag gagtgtccaaggagacaggtttcttgtctaaactgtgctgtatcgatggcatttgaagat aaagagatccatgaccagaactgtcctttggcaaatgtcatctgtgaatactgcaatact atgctcatcagagaacagatgcctaatcattatgatctagactgtcctacagccccaatt ccatgcacattcagtacttttggttgccatgaaaagatgcagaggattcacttggcacgc cacctgcaagagaatacccagtcacacatgagaatgttggcccaggctgttcagagttta aaccttgctttagctcccgtgcctcaacgtgatatgctgccatatgattctgcctctctg ccccgggtctctgggtgtcacccagaggtcccgaatttccaagaaaccatccaacaatta gaaggtcgccttgtaatacaagaccatcaaatccgggagctgactgcgaaaatggaaact cagagcatgtatgtaagtgagctcaaacgaactattcgaacccttgaggacaaagttgct gaaatagaagcacagcagtgcaatgggatttacatctggaagattggtaactttggtatg cacttgaaatctcaagaagaggaaaaacctgttgtcattcatagtcctggattctacaca ggcaaacctggatacaaactgtgcatgcggctgcaccttcagttaccaactgctcagcgc tgtgccaactatatatccctctttgtccacacaatgcaaggagagtatgacagccatctc ccttggcccttccagggcacaatacgccttacaattcttgatcagtctgaagcacctata aggcaaaaccatgaagagataatggatgcaaaaccagagttgctggccttccagagaccc acaatcccacggaacccaaaaggttttggctacgtgacttttatgcatttggaagctcta agacaaagaaccttcattaaggatgataccttattagtacgctgtgaagtctctacccgc ttcgacatgggtagtcttcgaagggaaggttttcagccacggagtactgatgcaggggta tag

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