Panacibacter ginsenosidivorans: FRZ67_16375
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Entry
FRZ67_16375 CDS
T06131
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FRZ67_16375 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgin03400
]
FRZ67_16375 (nth)
Enzymes [BR:
pgin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FRZ67_16375 (nth)
DNA repair and recombination proteins [BR:
pgin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FRZ67_16375 (nth)
Prokaryotic type
FRZ67_16375 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QEC68806
UniProt:
A0A5B8VDT2
LinkDB
All DBs
Position
complement(3899358..3900017)
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AA seq
219 aa
AA seq
DB search
MTRKERYAFVLDYFQQHVPVAETELVYDSPYQLLVAVILSAQCTDKRVNMTTPAIFEKYP
TVQDLAQTDFDTLFPFIKSISYPNNKTKHLINMANMVVKDFNGKIPMTVDELVKLPGVGR
KTANVITSVVDAQPNMAVDTHVFRVSARIGLTVNATTPLATEKQLISFIPKELIHIAHHW
LILHGRYTCVARNPKCEECGLRPACKYYHTVQKKASKEK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcaaagaacgttatgcttttgtgctcgattattttcaacagcatgttccggtt
gctgaaacagaactcgtttatgatagtccttatcaattgttggtagcggttattctctcc
gcacaatgcacagataaaagagtgaacatgacaacgcctgccatctttgaaaaatatccc
acggtgcaggatcttgcgcaaacagattttgacaccttgtttcctttcatcaaaagcatt
tcttatcctaataacaaaacgaagcacctcatcaacatggcaaatatggtggtgaaggat
tttaacggcaaaattccaatgaccgttgatgaactcgttaaacttcccggcgttggccgt
aagacggcaaatgttattacatccgttgtagatgcacaaccaaatatggcggttgatacg
catgtgtttcgcgtgtctgcacgaattggtttaacagtaaatgcaacaacacctcttgca
acagaaaaacaattgatctcttttataccaaaagaacttatacatattgcacatcactgg
ctaatattgcacggccgttacacctgcgttgcacgtaatcctaaatgcgaagaatgtggt
ttaaggcctgcgtgtaaatattatcacacagtgcagaaaaaagcatctaaagaaaagtaa
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