Paraburkholderia ginsengisoli: I6I06_28030
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Entry
I6I06_28030 CDS
T07246
Symbol
shc
Name
(GenBank) squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis00909
Sesquiterpenoid and triterpenoid biosynthesis
pgis01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
I6I06_28030 (shc)
Enzymes [BR:
pgis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
I6I06_28030 (shc)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
I6I06_28030 (shc)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
Pec_lyase
Motif
Other DBs
NCBI-ProteinID:
QQC66609
UniProt:
A0A7T4N7A1
LinkDB
All DBs
Position
2:complement(2543635..2545701)
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AA seq
688 aa
AA seq
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MNDLSQAQPLDDVLPETADAAPNVSADGQHALAVETQANAVAPVVSTASLDAAITRATDA
ILAAQQPDGHWVYELEADATIPAEYVLLVHYLGETPNLELEQKIARYLRRIQLPNGGWPL
FTDGALDISASVKAYFALKMIGDPADAEHMVRARDAILAHGGAENVNVFTRILLALFGVV
SWRAVPMMPVEIMLLPMWFPFHLSKVSYWARTVIVPLLVLNAKRPLARNPRKVRIDELFR
GAPVNTGMNDRAPHQHAGWFGFFRGVDTLLRGVDGLFPKATRERAVRAAVAFVDERLNGE
DGLGAIFPAMANSVMMYDVLGYPADHPNRAIARRSIDKLLVIKDDEAYCQPCLSPVWDTS
LVAHALLETGEAHAEQAAERGLAWLRPLQILDVRGDWISRRPNVRPGGWAFQYNNAHYPD
VDDTAVVVMAMQRSAALTQSTVDRDAIARAREWVLGMQSSDGGWGAFEPENTQYYLNNIP
FSDHGALLDPPTADVSGRCLSMLAQLGELPQSSEPAQRAFAYMLQEQESDGSWYGRWGLN
YIYGTWTALCSLNAAGMPHDDPRIRRAAQWLLSIQNPDGGWGEGGESYKLDYRGYERAPS
TASQTAWALMGLMAAGEVNHEAVARGVDYLQHEQREHGLWDETRFTATGFPRVFYLRYHG
YRKFFPLWALARFRHLKRNGLTRVAVGM
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacttatctcaagcccagcctctggacgacgtcttacccgaaactgccgacgcg
gcgcccaacgtatcggcggacgggcagcacgcgctggccgtcgagacgcaagcgaacgcc
gtcgcgccggtggtatcgaccgcctctctcgacgctgcgatcacgcgcgcgactgatgcg
attctcgccgcgcaacagccggacggccactgggtctacgaactcgaagccgacgcgacc
attcccgccgaatacgtattgctggttcattacctcggcgaaacgccgaacctcgaactg
gagcagaagatcgcgcgctatctgcgccgcatccagttgcccaacggcggctggccgctc
ttcaccgacggcgcactcgacatcagcgccagcgtgaaggcgtatttcgcgctgaagatg
atcggcgacccggcggatgccgagcacatggtgcgcgcgcgcgacgcgattctcgcgcac
ggcggcgcggaaaacgtcaacgtcttcacgcggattctgctggcgctgttcggcgtggtg
tcgtggcgcgcggtgccgatgatgcccgtcgaaatcatgctgctgccgatgtggttcccg
ttccatctgtcgaaggtgtcgtactgggcgcgtaccgtgatcgtgccgctgctggtgctc
aacgcgaagcgaccgctcgcgcgcaatccgcgcaaggtgcgcatcgacgagctgttccgc
ggcgcgccggtgaacaccggcatgaacgaccgggcgccgcatcagcacgcgggctggttc
ggctttttccgcggcgtggacacgttgctgcgcggggtcgacggcctgttcccgaaagca
acgcgcgagcgcgcggtgcgcgcggccgtggcctttgttgacgaacgcctgaacggcgaa
gacggcctcggcgcgattttccccgcgatggccaactcggtgatgatgtacgacgtgctc
ggctatccggccgatcacccgaatcgcgcgatcgctcgtcggtcgatcgacaagctgctc
gttatcaaggatgacgaagcatattgccagccgtgcctgtcgccggtctgggacacatcg
ctcgtcgcgcacgcgttgctcgaaaccggcgaggcacatgccgagcaggcggccgagcgc
gggctcgcgtggctgcgtccgctgcagattctcgacgtgcgcggggactggatttcgcgc
cgtcccaatgtgcggcccggcggctgggcgttccagtacaacaacgcgcactatccggac
gtcgacgatacggcggtcgtcgtgatggcgatgcagcgctcggcggcgctcacgcaatcc
accgtcgatcgcgacgccattgcacgcgcgcgcgaatgggtgctcggcatgcagagcagc
gacggcggctggggtgcgttcgaaccggaaaatacccagtactacctgaacaacattccg
ttctccgatcacggcgcgttgctcgatccgccgacggcggacgtctcgggccgctgcctg
tcgatgctcgcgcaactcggcgaactgccgcagagcagcgagccggcgcaacgcgcgttc
gcgtacatgctccaggagcaggagtcggacggtagctggtatgggcgctggggcctgaac
tacatctacggcacatggaccgcgctctgttcgctgaacgccgccggcatgccgcacgac
gacccgcgcatccggcgcgccgcgcagtggctgctgtcgatccagaacccggacggcggc
tggggcgagggcggcgagagctacaagctcgactatcgcggctacgagcgcgcgccgagc
acggcgtcgcagaccgcctgggcgttgatgggtctgatggcggcgggtgaggtgaatcac
gaagccgtcgcgcgcggcgtcgactacctccagcatgaacagcgcgagcacggcctgtgg
gacgaaacgcgcttcaccgcgaccggcttcccgcgcgtgttctatctgcgctaccacggc
tatcgaaagttcttcccgttgtgggcgctggcgcgcttccgtcatctgaagcgcaacggc
ctcacgcgcgtcgcggtcgggatgtaa
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