Pedobacter gandavensis: QG516_00020
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Entry
QG516_00020 CDS
T09013
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pgj
Pedobacter gandavensis
Pathway
pgj01501
beta-Lactam resistance
pgj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QG516_00020
01503 Cationic antimicrobial peptide (CAMP) resistance
QG516_00020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgj03036
]
QG516_00020
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgj02000
]
QG516_00020
01504 Antimicrobial resistance genes [BR:
pgj01504
]
QG516_00020
Chromosome and associated proteins [BR:
pgj03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
QG516_00020
Transporters [BR:
pgj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
QG516_00020
Antimicrobial resistance genes [BR:
pgj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QG516_00020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
HlyD_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
WGQ10040
LinkDB
All DBs
Position
complement(6558..7685)
Genome browser
AA seq
375 aa
AA seq
DB search
MKVKYLAYFPILAAVTIAGCTSKSQEPLAADQAKTVPIAAVSVLDTLIFKEYIADIQAAK
NVEVRSRLSGFLEKIYVEEGAAVKAGQILFKINDEEYKADLSKAEAVLNNAIADAKTVDL
EQQRTKVLVQSNIVSKTELDLGAAKLKAAESRVAEARSVLRYAKSRLSHTLIKSPFTGRI
DRMPLKAGSLLEEGSLLTSVSDLSTVNVYFSITEKEYLNIASDTAYSKNNFKKHVKLTLA
NGVVYPFQGIARFAESEFASQTGSLSLKASFPNADGLLKHGASGKISVPVETGEILAVHQ
KSVFEIQDRTYVYVLNSNNTIKMTPFEAGQRIGHYYMVNSGLKKSDKIVYEGTQSLRDGL
TVKPMDIKTNPIAKN
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaagtatttagcttatttcccaattttagctgccgttaccattgccggctgt
acttcaaagagccaggagccccttgctgcagaccaggccaaaaccgtccctatcgctgct
gtcagcgtattagacaccctgatttttaaagaatacatagccgatatccaggcggcaaaa
aacgtagaagtaaggtccaggttatccgggttcttagaaaagatctatgtagaagaaggt
gcagcagttaaagccggacaaatcctcttcaaaatcaatgatgaggaatacaaagctgat
ctgagtaaggccgaagcggtattgaacaatgccattgctgatgctaaaactgtagattta
gaacaacaaagaactaaggttttggtgcagagtaacatcgtttccaaaacagaattagat
ttaggcgctgctaagctgaaagctgcagaatcgcgtgtagcagaagccagatccgtgctg
cgttacgcgaaatccagactttctcatactttgatcaaatctcctttcacaggaaggatc
gacagaatgcctttaaaagcaggaagtttattggaggaaggttccctcctgacctctgta
tctgatttaagcacggtaaacgtgtatttttcgatcacagagaaggaatacctgaatatt
gccagcgatacggcctactcaaaaaacaacttcaaaaagcacgttaagctgacattagcg
aatggcgtcgtttatccttttcaaggaattgcaagatttgccgaaagtgaatttgcgagt
cagaccggctctttatcactgaaagccagctttccaaatgcggacggactgctaaaacat
ggtgcttccggtaaaatcagcgtacccgtagaaacaggagaaattttggcagttcatcag
aaatctgtgtttgagattcaggaccggacttatgtgtatgtgctgaattcaaataacacg
ataaaaatgacgccttttgaagccggacagcgcattggacactattatatggtgaactcc
ggactaaaaaaatcagataaaattgtctatgaaggcacccaaagcctgcgcgatgggctg
acggttaaaccaatggacatcaaaacaaaccctatcgctaaaaactaa
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