Pedobacter gandavensis: QG516_11585
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Entry
QG516_11585 CDS
T09013
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QG516_11585 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgj03400
]
QG516_11585 (nth)
Enzymes [BR:
pgj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QG516_11585 (nth)
DNA repair and recombination proteins [BR:
pgj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QG516_11585 (nth)
Prokaryotic type
QG516_11585 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF763
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WGQ12278
LinkDB
All DBs
Position
2772342..2773010
Genome browser
AA seq
222 aa
AA seq
DB search
MLKKDRYKLFVEHFAAKQPNAETELHYNNPYQLLVAVILSAQCTDKRINQVTPALFQRFP
NAKALSEVTPDIVFDYIRSVSYPNNKAKHLVGMAQMLLNDFNNVVPSDIDQLQKMPGVGR
KTANVIASVIYNAPAMAVDTHVYRVSRRIGLSAGKTPLAVEKDLVKNLPEHTIHVAHHWL
ILHGRYVCLARSPKCSICEITNICKYFQQNNKKTKIISDIQA
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaaaagaccggtataaactttttgtcgaacactttgcagccaaacagcccaat
gctgaaacggaattgcattacaataatccataccaattattagtggccgtaattctttct
gctcagtgcacagataaacgaatcaatcaggtaacacctgcactttttcaacgttttcca
aatgcaaaggctttatctgaggttacacctgatattgtttttgattacattagaagtgtg
agttacccgaataacaaggcaaaacacctggtaggaatggctcagatgttattaaatgat
tttaataatgtggttccttctgatattgatcaattacaaaagatgccgggtgtaggtcgc
aaaacggcaaacgtaatcgcatctgtcatttacaatgcccctgcaatggctgtggatacc
catgtatatagagtttccaggagaatcggcctttcagcaggaaaaactccgctcgctgta
gaaaaagacctggtaaagaacctacctgaacacaccattcatgtggctcaccactggtta
atcttacatggaagatatgtttgcctggccagatcaccgaaatgcagcatttgtgagatc
accaatatttgtaaatattttcaacaaaataataaaaaaactaaaataattagcgacata
caggcttga
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