Pedobacter gandavensis: QG516_12335
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Entry
QG516_12335 CDS
T09013
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00020
Citrate cycle (TCA cycle)
pgj00785
Lipoic acid metabolism
pgj01100
Metabolic pathways
pgj01110
Biosynthesis of secondary metabolites
pgj01120
Microbial metabolism in diverse environments
pgj01200
Carbon metabolism
pgj01210
2-Oxocarboxylic acid metabolism
Module
pgj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pgj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
QG516_12335
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
QG516_12335
Enzymes [BR:
pgj01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
QG516_12335
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Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
E1_dh
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
WGQ12413
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Position
complement(2940695..2943487)
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AA seq
930 aa
AA seq
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MDNLSYLSGENAEYVESLYQAFKEDPNSVEFGWQKFFEGFDFGRSSSPVTGEETPEHFLK
EVSVLNMINGYRQRGHLFTHTNPVRERRKHLPTLDLVNFNLSDADLDTVFNAGIELGIGA
VKLSEIVAFLNQTYCSSIGAEYKYVRTPEVLSWIEKKMESVRNTPNFSIEEKTRILTKLN
EAVCFENFLGTKFLGQKRFSLEGAEALIPALDSVIEKGAALGIEEFVIGMAHRGRLNVLA
NIMQKSYKDIFAEFEGKGYSAESPFGGDVKYHLGYSTDVTTNNGSNVHLSLCPNPSHLET
VNGVVEGMTRSKIDFKYDGDDARIAPILIHGDASIAGQGIVYEVIQMAGLDGYKTGGTIH
LIINNQIGFTTNYKDARSSTYCTDIAKVTLSPVFHVNGDDVEALVYAINLAMEYRQKYKN
DVFIDILCYRRFGHNESDEPKFTQPLLYKAIEQHANPRDIYVDQLVKEGKLEASAAKTME
KDFRGILQGCLNEAKAITSTYQDVKFGGAWKDMRIATVKDFEVSPDTSVDAATLLSVAES
ISTLPSDRKFFKKIEKLFDERSKMAKTSHVFDWAMGEQLAYGTLLSEGKRVRLSGQDVER
GTFSHRHAVLTLEDSEEEYIPLAHVSKDQASFDIYNSHLSEYGVLGFEYGYAMANPNALT
IWEAQFGDFFNGAQIVVDQYIASAETKWQRENGLVMLLPHGYEGQGPEHSSARIERFMEL
CADYNMQVANCSTPANFFHAIRRQFKRDFRKPLVVFTPKSLLRHPACVSKLTDFTEGKFQ
EVIDDTNVKAAEVTRVLFCSGKIYYELLEKQQKEKINQVAIVRVEQLYPTPVAQMEAVYA
KYKNATEAVWVQEEPENMGAWPYLLRRLRKTIFSDIEVISRKESSSTASGFAKQHADQQA
YILAKSFELPVSKGDKDIAKKSVSKVYNVD
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggataatttatcttatctcagcggcgaaaacgccgaatacgtagagtccctttatcaa
gcatttaaggaagatcccaattcggttgaatttggttggcagaaattttttgaaggcttt
gactttgggagaagctcatctccggttacaggagaagaaacccctgaacatttcctaaaa
gaagttagtgttttaaacatgatcaacggttaccgtcagcgtggccacctgtttacacat
actaacccggttagagaaagacgcaagcacttgccaactttagatctggtaaatttcaat
ttgtctgacgccgatcttgatactgtattcaatgcaggtattgagctgggcatcggagcg
gttaaattaagcgaaattgtggctttcttaaatcagacttactgcagttcgatcggtgcg
gagtacaagtacgtacgtacccctgaagtattgtcatggattgagaaaaaaatggaaagt
gttcgtaacacgcctaatttctctattgaggagaaaacaaggatcctgaccaaattgaat
gaggccgtatgctttgagaatttcctgggtacaaagttccttggacaaaaaagattctct
ctggaaggtgctgaggcattgattccggcattggactctgtgattgaaaaaggtgccgct
ttaggtattgaagagtttgtgattggtatggcgcatcgtggaaggctgaacgttttggct
aacattatgcagaaatcctataaagatatttttgctgaatttgaaggtaaaggatatagc
gcagaatcaccatttggtggtgatgtgaagtatcacttaggttattctacggacgtaacc
accaacaatggcagcaatgttcacttgagtttatgccctaacccttctcacctggaaaca
gtaaacggagtggtcgaagggatgaccaggtcgaaaattgatttcaaatatgatggtgat
gatgctcgcattgcaccaatcctgattcatggtgatgcttctatcgctggtcaggggatt
gtttatgaagtcattcagatggctggactggacgggtataaaaccggcggtaccattcac
ctgatcatcaacaaccagatcggtttcactacgaactataaagatgcccgttcgagtact
tactgtacagatattgctaaagtaaccttatcaccggttttccatgtaaatggagacgat
gtagaggccttggtttatgcaattaatctggctatggagtaccgtcagaaatataaaaat
gatgtgttcatcgatattttatgctaccgtagattcggtcataatgagtcggatgagcct
aaatttacccagcctttattgtataaagcaattgagcagcatgcaaatcctcgtgatatt
tatgttgatcagctggttaaagaaggtaaattagaagcatctgctgcgaaaacaatggaa
aaagatttccgtggtattttgcaaggctgtttaaatgaagcaaaagcgatcacttctacg
tatcaggatgtgaaatttggtggggcatggaaagacatgcgtattgctaccgtgaaagat
tttgaagtttctccggatacctcagtagatgcggcgactttattgagcgttgcagaaagc
atcagtactttgccttcagaccgaaagttcttcaagaaaattgagaaactttttgatgag
cgtagcaaaatggcaaaaacttctcatgtgttcgattgggcaatgggtgagcaattggct
tatggtacgttattaagtgaaggcaaacgtgttcgtttaagcggtcaggatgtggaaaga
ggaactttctctcaccgtcatgccgtgttaaccttagaagattctgaagaagaatacatc
ccattggcgcatgtttctaaagatcaggcttcttttgatatttacaattcacacttgtct
gagtatggtgtattgggctttgaatatggttatgccatggcaaatccgaatgcattaacg
atttgggaagcccaatttggtgatttctttaacggtgctcagatcgtagtggatcaatat
attgccagtgcagaaacgaaatggcagcgtgaaaatggtttggtgatgttattgccacat
ggttatgaaggtcaaggtccggaacactcttccgcacgtattgagcgtttcatggagcta
tgtgcagattataacatgcaagttgccaactgttcaacgccagcgaatttcttccatgca
atccgcagacaatttaaacgtgatttcagaaagccattggtggtatttacaccgaaaagt
ctgttacgtcaccctgcctgtgtctctaaattaaccgacttcactgaaggtaaattccag
gaagtgattgatgatacaaatgtgaaagctgctgaagtaaccagagtattgttctgcagc
ggtaagatctattatgagttgttggaaaaacaacaaaaagaaaagatcaatcaggtagcg
attgtaagggtagagcaattgtacccgacaccagtagcacagatggaagcggtttatgcg
aaatataaaaatgcaactgaagcagtttgggttcaggaagaacctgaaaacatgggtgca
tggccatatttgttacgtagactaagaaaaactatctttagtgatattgaagtgatttca
agaaaagagagcagcagtacagcttctggttttgcaaaacaacatgctgatcagcaagcg
tatattttagctaaatcttttgaattacctgtttctaaaggagacaaagacatcgctaaa
aagtctgtgagtaaagtatataatgtagattag
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