Pedobacter gandavensis: QG516_13840
Help
Entry
QG516_13840 CDS
T09013
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pgj
Pedobacter gandavensis
Pathway
pgj01501
beta-Lactam resistance
pgj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QG516_13840
01503 Cationic antimicrobial peptide (CAMP) resistance
QG516_13840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgj02000
]
QG516_13840
01504 Antimicrobial resistance genes [BR:
pgj01504
]
QG516_13840
Transporters [BR:
pgj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
QG516_13840
Antimicrobial resistance genes [BR:
pgj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QG516_13840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
WGQ07649
LinkDB
All DBs
Position
complement(3311618..3314767)
Genome browser
AA seq
1049 aa
AA seq
DB search
MNLLRIALRKPISIMVMVLGLLFFGIKASKDIKIDILPEMNLPVVYIAHSFNGYTPQQME
GYFTKMYVNMMLFTSGIKSIETKNTQGLTLMKLNFYEGIDMGQAIAEISALSNRSQVFLP
PGAPPPFIIRFDASSQPVGQLVFRSETKTNNQLQDIANFTARPFLIAIPGLTTAPPFGGS
PRTVEINIDPNKLRSHQLSPDQIVEAIGRNNITAPSGNVYINDINYLTPTNNTIKAVEDF
GNIPIFKGKADNLYIRDIATVKDGADITTGFALINGKRSVYINIAKSGNASTWDVVSKLK
KAIPNIQNNLPDDIKISYEFDQSVYVINAVKSLMVEGALGALLTGLMVLLFLGDKRSAII
VILTIPISIISGVLFLKLFGQSINIMSLSGLALAIGILVDESTVTIENIHQHLAMGKQKS
QAIWDACKEIAFPKLLILLCILAVFAPAFMMTGIPGALFMPLALAIGFSMIVSFLLSQTF
VPILCNWMMKPHSAAELAKESRFDHFRSRFIGFLESLLPKKKPVVILTFLAIGTLIYLMF
SITGTDVLPAVNSSQFQLRIKAPEGTRIEKTEQKIKQVLRELETVIGKDHIAISSVFIGQ
HPSSFAVSPIYLYNAGPHEALMQVALKDYSGNTSLLKDEIRAHLKQKMPELQLSFEPIEL
TEKILSQGTNTPIEVRFSGMMKKRNVMYANKLLAKLKEIDYLRDQQIPQSLNYPALAINI
DRVRAAQLGIDAQDIAKSLIASTASSRYTSKNMWVEGMMGIAYDVQVQTPQNILNSKDEL
ANIPLSKNSARPVLGDVATIMPSTTLGESYNLGTMAYTTVTANLHQMDLGRAQKDVNAAI
ASLGEIPKGLNISVAGMAPVLDETMDSLVNGLLVAVLVIFLMLTANFQSFKVSFVVLTTV
PFVVLGSLLLLKITGSTLNLQSYMGMIMSVGVSIANAVLLISNAETLRLQNGDAYASAMK
AAALRMRPIIMTSMAMIAGMLPMAIGHGEGGDQVSPLGRAVIGGLFASTFSVLILLPLVF
AWVQGKTGTTSPSLDPEDENSLHFVKPNA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaatttattacgtatagcattgcgcaagcccatctccattatggtgatggtgctcggg
cttttgttcttcgggatcaaagcctccaaggatatcaagattgatattcttccggaaatg
aaccttcctgtagtgtatatcgcccattcttttaatggctatactccacagcaaatggaa
ggatatttcaccaaaatgtatgtgaatatgatgctgtttaccagtggcattaaaagcata
gagactaaaaatacacagggattaaccctgatgaaactcaatttttatgaggggattgat
atgggacaagccattgcagagatctctgccttgtctaaccggtcgcaggtattcttacct
ccaggtgcaccaccaccctttattatccgttttgatgcgtcttcacagccagttggccag
ctggtgttcaggagtgaaacgaaaacaaacaaccagctgcaggacattgccaactttacg
gcgcggcccttcctgattgccatccccggattaactacagcgccaccttttggcggtagt
ccgagaacggtagagatcaatatcgatccgaataaactgcgcagtcaccagttatctccg
gatcagattgtggaagcgatcggccggaacaacatcacggcaccttcaggaaatgtctat
atcaacgacatcaattacctgacgccaacaaataacacgattaaagcggtagaagacttc
ggcaacattcctattttcaaaggaaaagccgacaacctgtatatccgtgatattgctacg
gtaaaagacggtgccgacattaccaccggtttcgccttgatcaatggcaagcgttccgta
tacatcaatattgctaaatcaggcaatgcttctacctgggatgtggtgagcaagctgaaa
aaagccattccaaacatccagaacaaccttcccgacgacatcaaaatttcttacgagttt
gaccagtcggtgtatgtaattaatgcagtgaaaagtttaatggtagaaggcgccttgggt
gccttacttaccggactaatggtattgctgtttttaggagacaagcgcagcgcgattatt
gtgatcctgacgattccaatttctatcatttcgggtgtactgttcctgaagcttttcggg
caatcgatcaacattatgtccttatccgggcttgcattggcgattgggattttggtggat
gagagtaccgtaaccattgagaatatccaccagcatctagctatgggcaaacaaaaatcc
caggcaatctgggatgcctgtaaagaaattgcatttccaaaactgctgattctgttgtgt
attctggctgttttcgccccagcctttatgatgactggcatcccgggtgctttatttatg
cctttagccctggccatcggtttctctatgatcgtttcgtttttattgtcgcaaaccttc
gtacccatcctgtgtaactggatgatgaaaccacattcggcagcagagttggctaaagaa
agccggtttgaccatttccgaagccgctttatcggctttctggaaagtttgctgcccaaa
aagaaaccagtggttattttgactttcctggctattggtactttgatttacttgatgttc
agcatcacgggaacagatgtccttcctgcggtaaactccagtcagtttcaattgagaatt
aaagcaccggaaggcaccagaattgaaaagacggagcaaaaaatcaagcaggtgctgcgg
gaattggaaacagtgattggcaaagaccatatcgcgatttcttccgtgtttattggacag
catccttcttcttttgcggtaagtccgatttacctgtacaatgcggggccgcatgaagct
ttgatgcaagtggctttaaaagattattccggaaacaccagcctgttaaaagatgaaatc
cgtgcgcacctgaaacagaaaatgccggaactccagctttcttttgagccgatcgagctg
acagaaaaaatcctgagccaggggacaaacacgcctatagaagttcgcttctcaggtatg
atgaaaaaaagaaacgtcatgtatgcgaataagctgctggcaaaattaaaggagatcgac
tatttaagagatcagcaaatccctcaatctttaaactatcccgcattggcgatcaatatc
gaccgtgtcagggcagcgcaattgggaattgatgctcaggatattgctaaatcattgatt
gcctcgacggcttcttcccgttataccagcaaaaacatgtgggttgagggaatgatgggc
atcgcttatgatgtgcaggtacagacacctcaaaatatcctgaacagcaaagatgagctg
gcaaatattccgctgtctaaaaattctgcccgtccggtattgggtgatgtggctacgatt
atgcccagcactaccttaggagaaagttataatttagggacgatggcctataccacagtg
accgccaatctgcaccagatggatttagggagggcacaaaaagatgtcaatgcagcaatt
gcttccctgggagagattcctaaagggctgaacatttctgtcgcagggatggcgccggtg
ctggacgaaacgatggatagcctggtaaatggattattagtggccgtattggtgattttc
ttaatgctgaccgccaatttccaatctttcaaggtgtcatttgtggtattgaccactgtg
ccttttgtggtactaggatcattactgctgcttaaaatcactggatcaacgctaaatctg
caatcctatatgggcatgatcatgtctgtgggagtatctattgcgaatgcggtattattg
attagtaatgcggaaacgttgaggctgcaaaacggagatgcttatgcttcggccatgaag
gctgctgctttaaggatgcgtccaatcatcatgacttctatggcgatgattgccggtatg
ctaccaatggccattggtcatggggaaggtggagatcaggtatccccattgggccgtgcg
gtgatcggcggattatttgcttctaccttctcggtactgattttattgccattagtattt
gcctgggtacagggaaaaaccggtacaacttcgccatccttagatccggaagatgaaaac
agtttacattttgttaaaccaaatgcttaa
DBGET
integrated database retrieval system
