Pedobacter gandavensis: QG516_18110
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Entry
QG516_18110 CDS
T09013
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pgj
Pedobacter gandavensis
Pathway
pgj01501
beta-Lactam resistance
pgj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QG516_18110
01503 Cationic antimicrobial peptide (CAMP) resistance
QG516_18110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgj02000
]
QG516_18110
01504 Antimicrobial resistance genes [BR:
pgj01504
]
QG516_18110
Transporters [BR:
pgj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
QG516_18110
Antimicrobial resistance genes [BR:
pgj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QG516_18110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
WGQ08451
LinkDB
All DBs
Position
4287800..4290976
Genome browser
AA seq
1058 aa
AA seq
DB search
MNMIRFALKKPLTIMVAVLAIAYFSFTAIKNINVDIFPKVELPVIYIAMPYGGLTPAYMD
GFMANEFQKVLIFVSGVKGIDFKSVQGFTLMKLSFYPGTDMAQASGELAAQVARAMGFLP
PGAVPPQVVRFDGSSLPIGQLVFESSHRSITELQNLALTKIRPMFVTIPGVTAPAPFGGN
ARTMVVKVNPELMLSYGLSAEEVTMAIAKNNFPAPAGNIRIGDQNLMSPANTMATGPEEF
LNIPIRTGSGTNVFVKDIASVEDAADVTTGYAVINGKRSVYLPVIKKADASTLKVVENLK
SSIPKLKAALPEDVDVKYVFDQSGYIERSLENLIHEGVLGAILTGLMVFLFLGDSRGALI
VVLTIPIAILSAVIMLYMFGQTINVMTLSGLALAIGILVDEATVTIENIHQHFEMEKPKQ
RAILDALLEISVPKILILFCILAVLIPSFMMTGIPKDMFMPLSLAVAFAMIASFIASQTF
VPILANWLMKPELFQHHKIALHSKKLTRFEKFKRRYLILIRGGQQRMVLVVGLYALLVLV
MIGVSGKQIGTDIMPASNSGDLQIRMLAPEGSRLEITEDYLAKMTKIIKAQMPEGAVKIS
SAYVGLQPSATAINPIFLFTSASHEAVLQLSVDQKIYTEAIAGLKEQIRNELNKQLPELR
ISFEPMELVEKIMSQGAMNPVQIKVAAGQIKGAEKYALKMEKELKNIPFLRDVRIAEPLN
YPSVQINVNRELAAQFGLSMDDVSKALTMATSSTRFTNKNLWIDPKSGLVFQVQVQVPEP
DMESLDKLRSLPLKTGQSRPVLEDVATLEMVKLPAQVNRQGPNRYVTVLANMHGADLGAA
SKAVDEVLKKVGEVPRGVIVSSEGLMPLLEETLSGLQTGLAVAIVVIFLMLTAYYQSFAL
SGLILAVVPAVIGGSLLMLLACGSTLNLQSYMGIIMSVGVSVSNAVLMINQAEVNRLKHG
MAVKQAALLAASSRLRPIIMTTMAMIAGMVPMAIGMGEGGEQIAPLGQAVIGGLILSTMT
ALLVLPQLFVLVMKNKTTDSLSLDPDDPFNKNVLNSSL
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgatcaggtttgcgctaaaaaaacctttaacaataatggttgccgtactggcg
atcgcctatttttcctttaccgccattaagaatatcaatgtcgatatttttcctaaagtg
gagttgccggtgatttatattgccatgccttatggtggactaactcctgcttatatggac
ggctttatggccaatgagtttcaaaaggtcctcatttttgtatcaggtgtaaaaggaatt
gacttcaaaagtgtacagggattcacgttgatgaagctcagcttttaccctggtactgat
atggcccaggcatcaggagaattggccgcacaagtggccagggcgatggggttcctacct
ccgggtgcagtgccaccgcaggtagtccgttttgatggcagttccctgcccatcggacaa
ttggtgtttgaaagttcgcatcgctctattacggaattgcaaaacctcgcgttgactaaa
atccggccgatgtttgtcaccattccaggtgttaccgcaccagcaccttttggtggaaat
gcccgtacaatggtagtcaaggtaaatccagaactcatgctttcttacggtttatccgca
gaagaagtcacaatggctattgccaaaaacaattttcctgcacctgccggaaacatcaga
atcggggatcagaacctgatgagtccagccaatacgatggctaccggaccagaagagttt
ttgaatattccaattagaaccggttcgggaaccaatgttttcgtaaaagatattgccagt
gtagaggatgcagcagatgtgaccacaggatatgccgtgatcaatggcaaacgatctgtt
tacctgccggtcattaaaaaagcagatgcgtccacacttaaagtcgtagaaaacctgaag
tcttccattccgaaattgaaagcagcattgccggaagatgtagatgtgaaatatgtattt
gatcagtcaggttatattgaacgatctttagaaaatctgattcatgaaggggtattaggg
gcaattttaactggattgatggtatttcttttccttggagattccaggggtgccttaatt
gtggtactgaccattccaatcgcaattctttcggcggtcattatgctctatatgtttggg
caaacgatcaatgtgatgacactgagtgggctggccctcgccatagggattctggtggat
gaggctacggtaaccatagagaatattcaccaacattttgaaatggagaagcccaaacaa
agggccattcttgatgctctgttagaaatttctgtccctaaaatcctgattcttttctgt
attctggcggttttgatcccctctttcatgatgactgggattccaaaagatatgtttatg
ccattgtcgctggccgttgcttttgctatgattgcttcttttattgcttctcagactttt
gtgcctattctggccaactggttaatgaagccggagctttttcagcaccataaaatcgcc
ctccatagcaagaaattgacaaggtttgaaaagtttaaacgtcgttacctgatcttgatc
cgtggaggacagcagcgaatggttttagtggttggtctgtatgcattattggtcttggtg
atgattggtgtttccggtaaacagataggtacagatattatgcctgctagtaatagcgga
gatcttcagattcgtatgctggcaccagaaggcagcagacttgaaataaccgaagattac
ctggcaaagatgacgaagatcatcaaagcccaaatgccagaaggtgcagtaaagattagc
tctgcttatgtgggtctacagccttctgccactgctattaatccgatttttctttttacc
agtgcttcacatgaagcggtattacagctgtctgtcgatcaaaagatctatactgaggcc
atagcaggattgaaagaacagatcaggaatgagctgaacaaacaattgcctgaactgcgg
atcagtttcgagccgatggaactggtggagaaaattatgagccagggggcgatgaatcct
gtgcagattaaggtagctgccggacaaataaaaggagcagagaaatatgcactgaagatg
gagaaagaattgaaaaatatcccttttctaagggatgtccgaattgctgaaccactcaat
tatccaagtgtacagattaatgtaaatcgggagttggccgcgcaatttggtctgagcatg
gatgatgtgagtaaagcgctaactatggctacctcttctaccagatttaccaataagaat
ctttggatagatccgaagtctggattggtgtttcaggtacaggttcaggtgccggaacca
gatatggaatctttagataagctgcgttctttgccacttaaaaccggacaatcgcgcccg
gtattggaagacgtagctacactggagatggtaaaattaccagcacaagtgaaccgtcag
gggccaaacaggtatgtgaccgtcctggcaaatatgcatggtgcagacctaggagctgct
tctaaagcagtggatgaggttttaaagaaggtaggtgaagtgcctagaggggtaatcgtc
agctcagaaggtttgatgccattattggaggaaaccttatcggggttacaaaccggattg
gcggttgcgattgtggtgattttcctgatgttgactgcctattatcagtctttcgctttg
tcgggattgatccttgcagtagttcctgcggtaattggtggaagtttactgatgctactc
gcttgtggaagtacattaaacctacaatcctatatgggcatcatcatgtcggtaggcgtg
tccgtgtctaatgcagtgctgatgatcaatcaggcagaagtgaaccggcttaaacatgga
atggccgtgaaacaggcggcattattggctgcttcttcacgtttacgcccgatcattatg
actacaatggccatgattgccggtatggtgcccatggccattggaatgggagaaggtgga
gaacaaattgccccattgggacaagcggtaattggtggtttaattttatctaccatgact
gccttactggtcttaccacagctatttgttctggtgatgaaaaataaaaccacagatagc
ctgagcctggatcctgatgacccattcaataaaaacgtattaaattcttctttataa
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