Pedobacter gandavensis: QG516_18115
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Entry
QG516_18115 CDS
T09013
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pgj
Pedobacter gandavensis
Pathway
pgj01501
beta-Lactam resistance
pgj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QG516_18115
01503 Cationic antimicrobial peptide (CAMP) resistance
QG516_18115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgj03036
]
QG516_18115
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgj02000
]
QG516_18115
01504 Antimicrobial resistance genes [BR:
pgj01504
]
QG516_18115
Chromosome and associated proteins [BR:
pgj03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
QG516_18115
Transporters [BR:
pgj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
QG516_18115
Antimicrobial resistance genes [BR:
pgj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QG516_18115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Period_C
Motif
Other DBs
NCBI-ProteinID:
WGQ08452
LinkDB
All DBs
Position
4291103..4292347
Genome browser
AA seq
414 aa
AA seq
DB search
MKSIFLKNYNYTLLLLIPMVLAACASGSSKQENGGKAGTEKNVGSSSGEGDGSGKDKIED
SGKTGESSKAEGTNLTIAGKGDAAKDAESQFVKPVLEQPIYQLSLPGELKPYEEVLVYPK
VKGFVKKIFVDRGTKVKKGQLLAVLEAPEIAQRYQSAKSDERKSYEDYLYSRQSFERLKK
AASKSGAVAAIELDKAWSKLRSDSAAYAAIKSNTQISNQLQQYLNLRAPFDGTVMDKNVS
VGALVGENSTIPLFSIVQNDRLRLTVAIPEKHSRAISKDTKASFTVSALPGKVFHASLSR
NAAFLQQKLRAVTTEFDVANKDGQLGGGEYAQVIMDMRRPQPTFWLPASTVVQAQSGVFI
VKLVDEVVKRVPVMIGTRKGALLEVFGDLNVNDQVFRKGTEELKEGEQPLPFKE
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtatttttctgaaaaactataattataccctgttactgttgatccctatggtt
ttagcggcatgtgcttccggatcctcaaagcaggagaatggggggaaggccggcactgaa
aaaaatgtaggcagttcttctggggagggcgatggaagtggtaaagacaaaatcgaggac
agtggcaaaactggtgaaagcagtaaagcagaggggacaaatcttacaattgctggaaaa
ggtgatgctgcaaaagatgccgaaagccaatttgtaaaacctgttttggaacagcccata
taccagctttctttacctggagaattgaagccttatgaagaggttttggtgtatccaaaa
gtgaaaggctttgtgaaaaagatatttgtagatcgaggtacaaaagtgaaaaaagggcag
ttgctggcagtgctggaagctcctgaaatcgcccagcgttaccaatctgcaaaatctgat
gaacggaaatcttatgaagattatttgtacagtcgccagagttttgagcgtctaaagaag
gcagccagtaaatccggagcagtagcagcgattgagctggataaggcctggagcaagttg
agaagtgacagtgctgcgtatgcagccataaaatctaatactcagatctccaatcaattg
cagcagtatttaaacctcagagctccctttgatggtacagtaatggacaaaaatgtgtct
gttggtgcattggtgggtgagaacagtacaattcctttgttctccattgttcaaaacgac
cgtctgagattaacggtggcaattccagagaaacacagtcgggcgatttcaaaagatacg
aaagcttctttcacagtgagcgccttgccaggcaaagtatttcatgcttcattgtctaga
aatgcagctttcctacagcaaaagctgcgggcagtaacgactgagtttgatgtggctaat
aaagacggacaactgggaggtggagagtatgcacaagtgattatggacatgcgcagaccg
caacctactttttggctgccagcttcgacggttgtgcaggcacaatcaggtgtgtttatt
gtgaaactggtagatgaggtagtgaagagagttccagtcatgataggtacacgtaaaggg
gcattgctggaagtattcggcgacttaaatgtgaacgatcaggtcttcagaaagggaact
gaagagttaaaggaaggagagcaacctttaccgtttaaagaataa
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