Pedobacter gandavensis: QG516_20255
Help
Entry
QG516_20255 CDS
T09013
Name
(GenBank) pyridoxal-phosphate dependent enzyme
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00260
Glycine, serine and threonine metabolism
pgj00270
Cysteine and methionine metabolism
pgj00670
One carbon pool by folate
pgj01100
Metabolic pathways
pgj01110
Biosynthesis of secondary metabolites
pgj01230
Biosynthesis of amino acids
Module
pgj_M00035
Methionine degradation
pgj_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QG516_20255
00270 Cysteine and methionine metabolism
QG516_20255
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
QG516_20255
Enzymes [BR:
pgj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
QG516_20255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
DUF116
Motif
Other DBs
NCBI-ProteinID:
WGQ08848
LinkDB
All DBs
Position
4822186..4823547
Genome browser
AA seq
453 aa
AA seq
DB search
MWYNNILETIGNTPLVKLNNITKEIPATVLAKVESTNPGNSIKDRMAVKMIEDAEKSGKL
KPGGTIIEGTSGNTGMGLAMAAIIKGYKCIFTTTDKQSKEKVDALRAFGAEVIVCPTNVE
PEDPRSYYSVSSRLEREVPNSWKPNQYDNLANSQAHYEQTGPEIWAQTEGKITHLVVGVG
TGGTISGTGKYLKEQNPDIKIWGIDTYGSVFKKYKETGILDKNEIYPYITEGIGEDFLPK
NVNFDIIDLFEKVTDKDAALMTRDIARKEGIFVGNSAGSAIAGLLQLKDKLKPEDVVVVI
FHDHGSRYMGKMYNEDWLRERGFLKDEKLTARSILSKKESAEIITIDCEKTILEAINNMN
TLNISQIPVTQQGMVVGKLAESDIIKALLENPSLKSAPVKEIMSSTFPFVDMNTSIDKIS
SLINKENSAVLVEDEDGRIEIITQYDIINAISA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtggtacaataatattttggaaaccattggtaatacgccattggtaaaattgaataac
attacgaaagaaattccggctacggtattggcgaaagttgaaagtaccaatcctggtaat
tcaattaaggatcgtatggcagttaaaatgattgaagacgcggagaagagcggtaagctt
aaaccgggtggaacgatcatagaaggtacttctggaaataccggaatgggcctggctatg
gcggcaattattaagggctataaatgtattttcaccactacagataagcagtctaaggag
aaagtagatgctttacgtgcttttggtgcggaagttatcgtttgtccaacgaacgtagaa
cctgaagatccaaggtcttattattcagtttcttcgcgtttagaacgtgaagttccgaat
tcatggaaaccgaatcaatatgataacctggccaattctcaggcacattatgagcagacg
gggcctgaaatctgggcacaaaccgaaggaaagatcacgcatttagtggttggggtaggt
actggtggtactatttctggtactggaaaatatttgaaagaacagaatcctgatattaaa
atctggggtattgatacttatggatcggtatttaagaaatataaagaaacaggtatttta
gataagaatgagatctatccttacattacagaagggattggagaagactttttaccaaag
aacgtaaattttgacatcattgatctttttgagaaagtgaccgataaagatgcagcccta
atgacgcgtgatattgcacgtaaagaagggatttttgttgggaattcagcaggatcggct
attgcaggactattgcagttaaaagataaactgaagccagaagatgtggtggtggtgatc
tttcatgatcatggaagccgttatatgggtaaaatgtacaatgaagattggttgagagaa
cgaggtttccttaaagatgagaagctgactgccaggtctattctttcaaaaaaggaatct
gcagaaatcattaccattgattgtgagaagaccattctggaagcgatcaataatatgaat
accttaaatatctctcagattccggtgactcaacaaggaatggtagtaggtaaattggcc
gaaagtgatatcattaaagcacttttagagaacccttctttaaaatctgcgccagtgaaa
gagattatgtcgagtaccttccctttcgtggatatgaacacttcgattgataagatttca
tcattgatcaataaagagaattcagcagtattggtagaagatgaggatggcagaattgag
attatcactcaatacgacatcattaacgcaatttctgcatag
DBGET
integrated database retrieval system
